RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ESYT1Q9BSJ8 1104 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 NAPBQ9H115 298 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 MYOM2P54296 1465 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 ZNF213O14771 459 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 STX6O43752 255 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 NEMFO60524 1076 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 KSR2Q6VAB6 950 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 SMC5Q8IY18 1101 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 ZNF287Q9HBT7 754 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 FERMT3Q86UX7 667 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 C8orf76Q96K31 380 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 ZCCHC11Q5TAX3 1644 aaKnown RBP8.37□□□□□ -1.07
CTNND1-218ENST00000528232 CHD1O14646 1710 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 KRT18P05783 430 aaKnown RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 MAP9Q49MG5 647 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 CEP85Q6P2H3 762 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 ANKRD13DQ6ZTN6 518 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 PHAXQ9H814 394 aaKnown RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
CTNND1-218ENST00000528232 BABAM1Q9NWV8 329 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 SBNO1A3KN83 1393 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 KLHL40Q2TBA0 621 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 ERLIN2O94905 339 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 TUBB4AP04350 444 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 CAMK4Q16566 473 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 BICDL1Q6ZP65 573 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 UBXN4Q92575 508 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 PHACTR3Q96KR7 559 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 EXOC5O00471 708 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 ZPR1O75312 459 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 UBE3BQ7Z3V4 1068 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 ABCF2Q9UG63 623 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 SBNO2Q9Y2G9 1366 aa8.36□□□□□ -1.07
CTNND1-218ENST00000528232 GOLIM4O00461 696 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 IL13P35225 146 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 TSHZ3Q63HK5 1081 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 TMX3Q96JJ7 454 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 NEK1Q96PY6 1258 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 KDM2BQ8NHM5 1336 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 GRM8O00222 908 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 HOXC9P31274 260 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-218ENST00000528232 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 BCCIPQ9P287 314 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■■□ 21.2
CTNND1-218ENST00000528232 TBX22Q9Y458 520 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
CTNND1-218ENST00000528232 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 PAXBP1Q9Y5B6 917 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 SLC12A7Q9Y666 1083 aa8.35□□□□□ -1.07
CTNND1-218ENST00000528232 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-218ENST00000528232 LUC7LQ9NQ29 371 aaKnown RBP8.35□□□□□ -1.07
CTNND1-218ENST00000528232 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-218ENST00000528232 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ATP2B2Q01814 1243 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 EYA1Q99502 592 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 UBE2HP62256 183 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 UVSSAQ2YD98 709 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 XAGE3Q8WTP9 111 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 GOLGA8AA7E2F4 631 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ZSCAN22P10073 491 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 MNAT1P51948 309 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ZFYVE27Q5T4F4 411 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 V9GYY5 206 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 GOLGA6L9A6NEM1 432 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ZFYP08048 801 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 USP5P45974 858 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 SKIDA1Q1XH10 827 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 TTC31Q49AM3 519 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-218ENST00000528232 WDR66Q8TBY9 1149 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 IP6K1Q92551 441 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
CTNND1-218ENST00000528232 ARHGEF10O15013 1369 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 KIF24Q5T7B8 1368 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 ZBTB7BO15156 539 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 ANXA1P04083 346 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 SPATA24Q86W54 205 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 PLEKHM2Q8IWE5 1019 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 ZSCAN16Q9H4T2 348 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 IQGAP3Q86VI3 1631 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 TET3O43151 1660 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 PIP4K2BP78356 416 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms