RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
USH1C-207ENST00000527720 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
USH1C-207ENST00000527720 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
USH1C-207ENST00000527720 SIL1Q9H173 461 aa18.49■□□□□ 0.55
USH1C-207ENST00000527720 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
USH1C-207ENST00000527720 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
USH1C-207ENST00000527720 TJP1Q07157 1748 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 PRPF40AO75400 957 aaKnown RBP18.48■□□□□ 0.55
USH1C-207ENST00000527720 PTH1RQ03431 593 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 PTPN12Q05209 780 aaKnown RBP18.48■□□□□ 0.55
USH1C-207ENST00000527720 NECTIN1Q15223 517 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 SLAIN2Q9P270 581 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
USH1C-207ENST00000527720 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
USH1C-207ENST00000527720 AK2P54819 239 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 CASP7P55210 303 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 VPS53Q5VIR6 699 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 A0A087WZG4 1122 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 MBD3O95983 291 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 IL2RBP14784 551 aa18.47■□□□□ 0.55
USH1C-207ENST00000527720 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
USH1C-207ENST00000527720 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.47■□□□□ 0.55
USH1C-207ENST00000527720 TCHHQ07283 1943 aa18.46■□□□□ 0.55
USH1C-207ENST00000527720 ZKSCAN1P17029 563 aaPredicted RBP18.46■□□□□ 0.55
USH1C-207ENST00000527720 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
USH1C-207ENST00000527720 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
USH1C-207ENST00000527720 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
USH1C-207ENST00000527720 ZSWIM6Q9HCJ5 1215 aa18.46■□□□□ 0.55
USH1C-207ENST00000527720 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
USH1C-207ENST00000527720 ATP5JP18859 108 aa18.46■□□□□ 0.54
USH1C-207ENST00000527720 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.54
USH1C-207ENST00000527720 NMIQ13287 307 aaPredicted RBP18.46■□□□□ 0.54
USH1C-207ENST00000527720 ZSCAN31Q96LW9 406 aaPredicted RBP18.46■□□□□ 0.54
USH1C-207ENST00000527720 NBPF26B4DH59 902 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 PRPF40BQ6NWY9 871 aaKnown RBP18.45■□□□□ 0.54
USH1C-207ENST00000527720 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
USH1C-207ENST00000527720 NBPF10Q6P3W6 841 aaKnown RBP18.45■□□□□ 0.54
USH1C-207ENST00000527720 NBPF15Q8N660 670 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 CYP46A1Q9Y6A2 500 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 JCADQ9P266 1359 aa18.45■□□□□ 0.54
USH1C-207ENST00000527720 H7C1W4 665 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 ZSCAN23Q3MJ62 389 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 RUFY3Q7L099 469 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 GPT2Q8TD30 523 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
USH1C-207ENST00000527720 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
USH1C-207ENST00000527720 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
USH1C-207ENST00000527720 NCLP19338 710 aaKnown RBP18.44■□□□□ 0.54
USH1C-207ENST00000527720 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
USH1C-207ENST00000527720 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
USH1C-207ENST00000527720 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 PSMA5P28066 241 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 RNF20Q5VTR2 975 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 CREB3L3Q68CJ9 461 aa18.43■□□□□ 0.54
USH1C-207ENST00000527720 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
USH1C-207ENST00000527720 TFCP2Q12800 502 aa18.42■□□□□ 0.54
USH1C-207ENST00000527720 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
USH1C-207ENST00000527720 DBNLQ9UJU6 430 aaKnown RBP18.42■□□□□ 0.54
USH1C-207ENST00000527720 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
USH1C-207ENST00000527720 A0A0D9SFI3 127 aa18.41■□□□□ 0.54
USH1C-207ENST00000527720 KCNJ4P48050 445 aa18.41■□□□□ 0.54
USH1C-207ENST00000527720 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
USH1C-207ENST00000527720 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
USH1C-207ENST00000527720 FOXO4P98177 505 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 ADCK5Q3MIX3 580 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
USH1C-207ENST00000527720 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
USH1C-207ENST00000527720 ALDH8A1Q9H2A2 487 aaPredicted RBP18.4■□□□□ 0.54
USH1C-207ENST00000527720 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
USH1C-207ENST00000527720 TSGA10IPQ3SY00 556 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 LMBR1LQ6UX01 489 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
USH1C-207ENST00000527720 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
USH1C-207ENST00000527720 SPEF2Q9C093 1822 aa18.39■□□□□ 0.54
USH1C-207ENST00000527720 SLC27A2O14975 620 aa18.39■□□□□ 0.54
USH1C-207ENST00000527720 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.54
USH1C-207ENST00000527720 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.53
USH1C-207ENST00000527720 TMEM87AQ8NBN3 555 aa18.39■□□□□ 0.53
USH1C-207ENST00000527720 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
USH1C-207ENST00000527720 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
USH1C-207ENST00000527720 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
USH1C-207ENST00000527720 ITGB4P16144 1822 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
USH1C-207ENST00000527720 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 HAUS7Q99871 368 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 STX6O43752 255 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms