RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
SORL1-205ENST00000527649 ZPR1O75312 459 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 ADRA2BP18089 450 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 SSFA2P28290 1259 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 CASP7P55210 303 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
SORL1-205ENST00000527649 H7C1W4 665 aa16.97■□□□□ 0.31
SORL1-205ENST00000527649 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
SORL1-205ENST00000527649 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
SORL1-205ENST00000527649 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
SORL1-205ENST00000527649 NIP7Q9Y221 180 aaKnown RBP eCLIP16.97■□□□□ 0.31
SORL1-205ENST00000527649 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
SORL1-205ENST00000527649 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
SORL1-205ENST00000527649 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.31
SORL1-205ENST00000527649 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
SORL1-205ENST00000527649 FAM89AQ96GI7 184 aa16.96■□□□□ 0.31
SORL1-205ENST00000527649 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
SORL1-205ENST00000527649 SUSD4Q5VX71 490 aa16.95■□□□□ 0.3
SORL1-205ENST00000527649 BICDL1Q6ZP65 573 aa16.95■□□□□ 0.3
SORL1-205ENST00000527649 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
SORL1-205ENST00000527649 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
SORL1-205ENST00000527649 FAM177BA6PVY3 158 aa16.94■□□□□ 0.3
SORL1-205ENST00000527649 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
SORL1-205ENST00000527649 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 RGL2O15211 777 aa16.94■□□□□ 0.3
SORL1-205ENST00000527649 PCCAP05165 728 aaPredicted RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 COL23A1Q86Y22 540 aaPredicted RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
SORL1-205ENST00000527649 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
SORL1-205ENST00000527649 GYS1P13807 737 aa16.93■□□□□ 0.3
SORL1-205ENST00000527649 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
SORL1-205ENST00000527649 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
SORL1-205ENST00000527649 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
SORL1-205ENST00000527649 ATP8B2P98198 1209 aa16.92■□□□□ 0.3
SORL1-205ENST00000527649 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
SORL1-205ENST00000527649 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
SORL1-205ENST00000527649 NTSR2O95665 410 aa16.92■□□□□ 0.3
SORL1-205ENST00000527649 FOXO4P98177 505 aa16.91■□□□□ 0.3
SORL1-205ENST00000527649 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
SORL1-205ENST00000527649 STK32BQ9NY57 414 aa16.91■□□□□ 0.3
SORL1-205ENST00000527649 MSH5O43196 834 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 MTX1Q13505 466 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 NFIXQ14938 502 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 SKAP1Q86WV1 359 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 NUTM1Q86Y26 1132 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
SORL1-205ENST00000527649 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.3
SORL1-205ENST00000527649 SSH3Q8TE77 659 aa16.89■□□□□ 0.3
SORL1-205ENST00000527649 COL24A1Q17RW2 1714 aa16.89■□□□□ 0.3
SORL1-205ENST00000527649 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 HMMRO75330 724 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 POLA2Q14181 598 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
SORL1-205ENST00000527649 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 FLAD1Q8NFF5 587 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 SH3TC1Q8TE82 1336 aa16.89■□□□□ 0.29
SORL1-205ENST00000527649 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
SORL1-205ENST00000527649 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
SORL1-205ENST00000527649 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
SORL1-205ENST00000527649 ERFEQ4G0M1 354 aa16.87■□□□□ 0.29
SORL1-205ENST00000527649 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
SORL1-205ENST00000527649 PDGFDQ9GZP0 370 aaPredicted RBP16.87■□□□□ 0.29
SORL1-205ENST00000527649 DCTPP1Q9H773 170 aa16.87■□□□□ 0.29
SORL1-205ENST00000527649 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
SORL1-205ENST00000527649 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
SORL1-205ENST00000527649 TM4SF1P30408 202 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 CCDC24Q8N4L8 307 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
SORL1-205ENST00000527649 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
SORL1-205ENST00000527649 DDX60Q8IY21 1712 aaKnown RBP16.86■□□□□ 0.29
SORL1-205ENST00000527649 DDR1Q08345 913 aa16.85■□□□□ 0.29
SORL1-205ENST00000527649 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
SORL1-205ENST00000527649 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
SORL1-205ENST00000527649 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
SORL1-205ENST00000527649 QSER1Q2KHR3 1735 aa16.85■□□□□ 0.29
SORL1-205ENST00000527649 APBB1O00213 710 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
SORL1-205ENST00000527649 CTSWP56202 376 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 MYH3P11055 1940 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 PDE8AO60658 829 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 CSF1RP07333 972 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 FAM161AQ3B820 660 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
SORL1-205ENST00000527649 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
SORL1-205ENST00000527649 GTF2E1P29083 439 aaPredicted RBP16.83■□□□□ 0.28
SORL1-205ENST00000527649 TPTE2Q6XPS3 522 aa16.83■□□□□ 0.28
SORL1-205ENST00000527649 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms