RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SASH1O94885 1247 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 REC8O95072 547 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 HSP90AB3PQ58FF7 597 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 LMBR1LQ6UX01 489 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 GIGYF2Q6Y7W6 1299 aaKnown RBP19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 USP42Q9H9J4 1324 aaKnown RBP19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 LOC102724428A0A0B4J2F2 783 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 SIK1P57059 783 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 FOXO4P98177 505 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 AACSQ86V21 672 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 KLHDC4Q8TBB5 520 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
SNRNP35-204ENST00000527158 RFX5P48382 616 aaPredicted RBP19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 GLRX3O76003 335 aaKnown RBP19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 HSPA1LP34931 641 aa19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 PTPN12Q05209 780 aaKnown RBP19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 ECHDC1Q9NTX5 307 aa19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 CHMP3Q9Y3E7 222 aa19.8■□□□□ 0.76
SNRNP35-204ENST00000527158 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
SNRNP35-204ENST00000527158 TJP1Q07157 1748 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 ERVV-1B6SEH8 477 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 KCNQ2O43526 872 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 USP26Q9BXU7 913 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
SNRNP35-204ENST00000527158 PCCAP05165 728 aaPredicted RBP19.77■□□□□ 0.76
SNRNP35-204ENST00000527158 DZIP3Q86Y13 1208 aaKnown RBP19.77■□□□□ 0.76
SNRNP35-204ENST00000527158 TBC1D2Q9BYX2 928 aa19.77■□□□□ 0.76
SNRNP35-204ENST00000527158 CHMLP26374 656 aa19.77■□□□□ 0.75
SNRNP35-204ENST00000527158 HLFQ16534 295 aa19.77■□□□□ 0.75
SNRNP35-204ENST00000527158 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.75
SNRNP35-204ENST00000527158 EAF2Q96CJ1 260 aaPredicted RBP19.77■□□□□ 0.75
SNRNP35-204ENST00000527158 CRKLP46109 303 aaKnown RBP19.76■□□□□ 0.75
SNRNP35-204ENST00000527158 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
SNRNP35-204ENST00000527158 TBC1D2BQ9UPU7 963 aa19.76■□□□□ 0.75
SNRNP35-204ENST00000527158 EIF5P55010 431 aaKnown RBP19.75■□□□□ 0.75
SNRNP35-204ENST00000527158 ESYT1Q9BSJ8 1104 aa19.75■□□□□ 0.75
SNRNP35-204ENST00000527158 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.75■□□□□ 0.75
SNRNP35-204ENST00000527158 TUBGCP6Q96RT7 1819 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 MAP4K4O95819 1239 aaPredicted RBP19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 CCDC8Q9H0W5 538 aaPredicted RBP19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 GPTP24298 496 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 ITPK1Q13572 414 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 NLRP10Q86W26 655 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 HSCBQ8IWL3 235 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 GJD4Q96KN9 370 aaPredicted RBP19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.74■□□□□ 0.75
SNRNP35-204ENST00000527158 KIF2CQ99661 725 aa19.73■□□□□ 0.75
SNRNP35-204ENST00000527158 TFCP2Q12800 502 aa19.73■□□□□ 0.75
SNRNP35-204ENST00000527158 PLA2G12BQ9BX93 195 aa19.73■□□□□ 0.75
SNRNP35-204ENST00000527158 AFF2P51816 1311 aa19.72■□□□□ 0.75
SNRNP35-204ENST00000527158 CCDC57Q2TAC2 916 aa19.72■□□□□ 0.75
SNRNP35-204ENST00000527158 SNX21Q969T3 373 aa19.72■□□□□ 0.75
SNRNP35-204ENST00000527158 CDHR2Q9BYE9 1310 aa19.71■□□□□ 0.75
SNRNP35-204ENST00000527158 TNNI3KQ59H18 835 aa19.71■□□□□ 0.75
SNRNP35-204ENST00000527158 FPGT-TNNI3KV9GXZ4 949 aa19.71■□□□□ 0.75
SNRNP35-204ENST00000527158 IL15P40933 162 aaPredicted RBP19.71■□□□□ 0.75
SNRNP35-204ENST00000527158 EVI5LQ96CN4 794 aa19.7■□□□□ 0.74
SNRNP35-204ENST00000527158 TRMT112Q9UI30 125 aaKnown RBP19.7■□□□□ 0.74
SNRNP35-204ENST00000527158 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
SNRNP35-204ENST00000527158 TLR7Q9NYK1 1049 aaKnown RBP19.7■□□□□ 0.74
SNRNP35-204ENST00000527158 CICQ96RK0 1608 aaPredicted RBP19.69■□□□□ 0.74
SNRNP35-204ENST00000527158 EYA2O00167 538 aa19.69■□□□□ 0.74
SNRNP35-204ENST00000527158 CIAO1O76071 339 aa19.69■□□□□ 0.74
SNRNP35-204ENST00000527158 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
SNRNP35-204ENST00000527158 CSF1RP07333 972 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 MCCP23508 829 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 RABEP1Q15276 862 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 ANO2Q9NQ90 1003 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 THSD7AQ9UPZ6 1657 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 ATG9AQ7Z3C6 839 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 FBXO3Q9UK99 471 aa19.68■□□□□ 0.74
SNRNP35-204ENST00000527158 EPB41L2O43491 1005 aaKnown RBP19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 IFIT5Q13325 482 aaKnown RBP19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 GPR108Q9NPR9 543 aa19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 IRS4O14654 1257 aaPredicted RBP19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 RUFY2Q8WXA3 655 aa19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 DIAPH3Q9NSV4 1193 aa19.67■□□□□ 0.74
SNRNP35-204ENST00000527158 ONECUT3O60422 494 aaPredicted RBP19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 BOLA2Q9H3K6 86 aa19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 DBNLQ9UJU6 430 aaKnown RBP19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 RREB1Q92766 1687 aa19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 ATP5JP18859 108 aa19.66■□□□□ 0.74
SNRNP35-204ENST00000527158 UBN2Q6ZU65 1347 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 NUP98P52948 1817 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 HIP1O00291 1037 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 LRRC24Q50LG9 513 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 SYNE4Q8N205 404 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 ATRNO75882 1429 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 AK9Q5TCS8 1911 aa19.65■□□□□ 0.74
SNRNP35-204ENST00000527158 SGSM2O43147 1006 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 PDE8AO60658 829 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 CTSWP56202 376 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms