RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TPTE2Q6XPS3 522 aa18.48■□□□□ 0.55
SSRP1-203ENST00000526696 RNF186Q9NXI6 227 aa18.48■□□□□ 0.55
SSRP1-203ENST00000526696 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
SSRP1-203ENST00000526696 HUNKP57058 714 aa18.47■□□□□ 0.55
SSRP1-203ENST00000526696 CRY2Q49AN0 593 aa18.47■□□□□ 0.55
SSRP1-203ENST00000526696 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
SSRP1-203ENST00000526696 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
SSRP1-203ENST00000526696 POLR2AP24928 1970 aaKnown RBP18.46■□□□□ 0.55
SSRP1-203ENST00000526696 KCNQ3O43525 872 aa18.46■□□□□ 0.55
SSRP1-203ENST00000526696 TRPA1O75762 1119 aa18.46■□□□□ 0.55
SSRP1-203ENST00000526696 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
SSRP1-203ENST00000526696 NIP7Q9Y221 180 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSRP1-203ENST00000526696 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
SSRP1-203ENST00000526696 KIF23Q02241 960 aaPredicted RBP18.45■□□□□ 0.54
SSRP1-203ENST00000526696 TRPM4Q8TD43 1214 aa18.45■□□□□ 0.54
SSRP1-203ENST00000526696 GCC1Q96CN9 775 aa18.45■□□□□ 0.54
SSRP1-203ENST00000526696 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
SSRP1-203ENST00000526696 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
SSRP1-203ENST00000526696 GMPSP49915 693 aaPredicted RBP18.44■□□□□ 0.54
SSRP1-203ENST00000526696 CXCL9Q07325 125 aa18.44■□□□□ 0.54
SSRP1-203ENST00000526696 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
SSRP1-203ENST00000526696 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
SSRP1-203ENST00000526696 NIM1KQ8IY84 436 aa18.44■□□□□ 0.54
SSRP1-203ENST00000526696 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SSRP1-203ENST00000526696 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
SSRP1-203ENST00000526696 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
SSRP1-203ENST00000526696 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
SSRP1-203ENST00000526696 AOC3Q16853 763 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 RGMBQ6NW40 437 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
SSRP1-203ENST00000526696 ZNF652Q9Y2D9 606 aa18.42■□□□□ 0.54
SSRP1-203ENST00000526696 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
SSRP1-203ENST00000526696 HLFQ16534 295 aa18.41■□□□□ 0.54
SSRP1-203ENST00000526696 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
SSRP1-203ENST00000526696 PANK3Q9H999 370 aa18.41■□□□□ 0.54
SSRP1-203ENST00000526696 SZT2Q5T011 3432 aa18.4■□□□□ 0.54
SSRP1-203ENST00000526696 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
SSRP1-203ENST00000526696 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
SSRP1-203ENST00000526696 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
SSRP1-203ENST00000526696 NBPF26B4DH59 902 aa18.39■□□□□ 0.53
SSRP1-203ENST00000526696 TCERG1O14776 1098 aaKnown RBP18.39■□□□□ 0.53
SSRP1-203ENST00000526696 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
SSRP1-203ENST00000526696 TEFQ10587 303 aa18.39■□□□□ 0.53
SSRP1-203ENST00000526696 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.53
SSRP1-203ENST00000526696 KIAA0100Q14667 2235 aaKnown RBP18.39■□□□□ 0.53
SSRP1-203ENST00000526696 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
SSRP1-203ENST00000526696 CEP290O15078 2479 aa18.38■□□□□ 0.53
SSRP1-203ENST00000526696 ZNRF3Q9ULT6 936 aa18.38■□□□□ 0.53
SSRP1-203ENST00000526696 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
SSRP1-203ENST00000526696 RGL2O15211 777 aa18.37■□□□□ 0.53
SSRP1-203ENST00000526696 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
SSRP1-203ENST00000526696 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
SSRP1-203ENST00000526696 PPEF1O14829 653 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-203ENST00000526696 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-203ENST00000526696 ZNF157P51786 506 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-203ENST00000526696 KIF7Q2M1P5 1343 aa18.36■□□□□ 0.53
SSRP1-203ENST00000526696 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
SSRP1-203ENST00000526696 GBA2Q9HCG7 927 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-203ENST00000526696 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
SSRP1-203ENST00000526696 HTTP42858 3142 aa18.35■□□□□ 0.53
SSRP1-203ENST00000526696 CDHR2Q9BYE9 1310 aa18.35■□□□□ 0.53
SSRP1-203ENST00000526696 SLC10A3P09131 477 aa18.35■□□□□ 0.53
SSRP1-203ENST00000526696 NUP98P52948 1817 aa18.35■□□□□ 0.53
SSRP1-203ENST00000526696 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
SSRP1-203ENST00000526696 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
SSRP1-203ENST00000526696 CRAMP1Q96RY5 1269 aa18.34■□□□□ 0.53
SSRP1-203ENST00000526696 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
SSRP1-203ENST00000526696 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
SSRP1-203ENST00000526696 RAD17O75943 681 aa18.33■□□□□ 0.52
SSRP1-203ENST00000526696 EGFRP00533 1210 aa18.33■□□□□ 0.52
SSRP1-203ENST00000526696 PKN2Q16513 984 aaKnown RBP18.33■□□□□ 0.52
SSRP1-203ENST00000526696 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.52
SSRP1-203ENST00000526696 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 YDJCA8MPS7 323 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 KRT26Q7Z3Y9 468 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 ZNF296Q8WUU4 475 aaPredicted RBP18.32■□□□□ 0.52
SSRP1-203ENST00000526696 RTFDC1Q9BY42 306 aaPredicted RBP18.32■□□□□ 0.52
SSRP1-203ENST00000526696 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 BRCA2P51587 3418 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 CENPFP49454 3210 aa18.32■□□□□ 0.52
SSRP1-203ENST00000526696 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
SSRP1-203ENST00000526696 MICALL2Q8IY33 904 aa18.31■□□□□ 0.52
SSRP1-203ENST00000526696 C2orf69Q8N8R5 385 aa18.31■□□□□ 0.52
SSRP1-203ENST00000526696 RBM17Q96I25 401 aaKnown RBP18.31■□□□□ 0.52
SSRP1-203ENST00000526696 NYXQ9GZU5 481 aa18.3■□□□□ 0.52
SSRP1-203ENST00000526696 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
SSRP1-203ENST00000526696 UBN2Q6ZU65 1347 aa18.29■□□□□ 0.52
SSRP1-203ENST00000526696 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
SSRP1-203ENST00000526696 RASAL3Q86YV0 1011 aa18.29■□□□□ 0.52
SSRP1-203ENST00000526696 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
SSRP1-203ENST00000526696 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-203ENST00000526696 H7C1D1 291 aa18.28■□□□□ 0.52
SSRP1-203ENST00000526696 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
SSRP1-203ENST00000526696 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
SSRP1-203ENST00000526696 TNIP1Q15025 636 aa18.28■□□□□ 0.52
SSRP1-203ENST00000526696 A0A0C4DFX4 3053 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms