RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 VPS53Q5VIR6 699 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 JAKMIP1Q96N16 626 aaKnown RBP24.52■■□□□ 1.52
SMIM3-201ENST00000526627 USP16Q9Y5T5 823 aa24.52■■□□□ 1.52
SMIM3-201ENST00000526627 NEXNQ0ZGT2 675 aa24.51■■□□□ 1.51
SMIM3-201ENST00000526627 NMIQ13287 307 aaPredicted RBP24.51■■□□□ 1.51
SMIM3-201ENST00000526627 TMEM87AQ8NBN3 555 aa24.51■■□□□ 1.51
SMIM3-201ENST00000526627 CYP27B1O15528 508 aa24.51■■□□□ 1.51
SMIM3-201ENST00000526627 ZSCAN22P10073 491 aaPredicted RBP24.5■■□□□ 1.51
SMIM3-201ENST00000526627 SYT1P21579 422 aa24.5■■□□□ 1.51
SMIM3-201ENST00000526627 MAP4K1Q92918 833 aa24.5■■□□□ 1.51
SMIM3-201ENST00000526627 PDRG1Q9NUG6 133 aa24.5■■□□□ 1.51
SMIM3-201ENST00000526627 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.5■■□□□ 1.51
SMIM3-201ENST00000526627 RBM8AQ9Y5S9 174 aaKnown RBP24.5■■□□□ 1.51
SMIM3-201ENST00000526627 CABLES1Q8TDN4 633 aa24.5■■□□□ 1.51
SMIM3-201ENST00000526627 ST3GAL1Q11201 340 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 BOLA2Q9H3K6 86 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 PKD1L3Q7Z443 1732 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 TMEM94Q12767 1356 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 STRCP1A6NGW2 1772 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 HIP1O00291 1037 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 STX6O43752 255 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 SNRPA1P09661 255 aaKnown RBP24.49■■□□□ 1.51
SMIM3-201ENST00000526627 ATF3P18847 181 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 CREB3L3Q68CJ9 461 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 ANKRD13DQ6ZTN6 518 aa24.49■■□□□ 1.51
SMIM3-201ENST00000526627 RFX5P48382 616 aaPredicted RBP24.48■■□□□ 1.51
SMIM3-201ENST00000526627 PIP4K2AP48426 406 aaPredicted RBP24.48■■□□□ 1.51
SMIM3-201ENST00000526627 DCAF5Q96JK2 942 aa24.48■■□□□ 1.51
SMIM3-201ENST00000526627 CYP46A1Q9Y6A2 500 aa24.48■■□□□ 1.51
SMIM3-201ENST00000526627 A0A0D9SFI3 127 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 SMC3Q9UQE7 1217 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 PLEKHG2Q9H7P9 1386 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 GLI3P10071 1580 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 CHRNA2Q15822 529 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 ZSCAN30Q86W11 494 aa24.47■■□□□ 1.51
SMIM3-201ENST00000526627 CSB-PGBD3P0DP91 1061 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 COL9A3Q14050 684 aaPredicted RBP24.46■■□□□ 1.51
SMIM3-201ENST00000526627 CCDC83Q8IWF9 413 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 JARID2Q92833 1246 aaPredicted RBP24.46■■□□□ 1.51
SMIM3-201ENST00000526627 COPRSQ9NQ92 184 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 CNPY2Q9Y2B0 182 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 DCCP43146 1447 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 MED23Q9ULK4 1368 aa24.46■■□□□ 1.51
SMIM3-201ENST00000526627 DDX54Q8TDD1 881 aaKnown RBP24.46■■□□□ 1.51
SMIM3-201ENST00000526627 SLC27A2O14975 620 aa24.45■■□□□ 1.51
SMIM3-201ENST00000526627 F13A1P00488 732 aa24.45■■□□□ 1.51
SMIM3-201ENST00000526627 ZSCAN31Q96LW9 406 aaPredicted RBP24.45■■□□□ 1.51
SMIM3-201ENST00000526627 TNS3Q68CZ2 1445 aa24.45■■□□□ 1.5
SMIM3-201ENST00000526627 SH2B1Q9NRF2 756 aaPredicted RBP24.45■■□□□ 1.5
SMIM3-201ENST00000526627 COL15A1P39059 1388 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 AFDNP55196 1824 aaKnown RBP24.44■■□□□ 1.5
SMIM3-201ENST00000526627 ARFGEF2Q9Y6D5 1785 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 RABL6Q3YEC7 729 aaPredicted RBP24.44■■□□□ 1.5
SMIM3-201ENST00000526627 SYAP1Q96A49 352 aaPredicted RBP24.44■■□□□ 1.5
SMIM3-201ENST00000526627 FMNL2Q96PY5 1086 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 FSD1Q9BTV5 496 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 JCADQ9P266 1359 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 DTNBO60941 627 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 ZKSCAN1P17029 563 aaPredicted RBP24.44■■□□□ 1.5
SMIM3-201ENST00000526627 GJB2P29033 226 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 PTPN12Q05209 780 aaKnown RBP24.44■■□□□ 1.5
SMIM3-201ENST00000526627 ME3Q16798 604 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 HS1BP3Q53T59 392 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 TTC5Q8N0Z6 440 aa24.44■■□□□ 1.5
SMIM3-201ENST00000526627 PRKCSHP14314 528 aaPredicted RBP24.43■■□□□ 1.5
SMIM3-201ENST00000526627 TSPY26PQ9H489 355 aa24.43■■□□□ 1.5
SMIM3-201ENST00000526627 MTMR6Q9Y217 621 aa24.43■■□□□ 1.5
SMIM3-201ENST00000526627 NAP1L5Q96NT1 182 aaPredicted RBP24.42■■□□□ 1.5
SMIM3-201ENST00000526627 DBNLQ9UJU6 430 aaKnown RBP24.42■■□□□ 1.5
SMIM3-201ENST00000526627 TPCN1Q9ULQ1 816 aa24.42■■□□□ 1.5
SMIM3-201ENST00000526627 TAF6LQ9Y6J9 622 aa24.42■■□□□ 1.5
SMIM3-201ENST00000526627 CASP7P55210 303 aa24.41■■□□□ 1.5
SMIM3-201ENST00000526627 ZNF589Q86UQ0 364 aaPredicted RBP24.41■■□□□ 1.5
SMIM3-201ENST00000526627 EDC3Q96F86 508 aaKnown RBP24.41■■□□□ 1.5
SMIM3-201ENST00000526627 UBE3BQ7Z3V4 1068 aa24.41■■□□□ 1.5
SMIM3-201ENST00000526627 KCNJ4P48050 445 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 RNF214Q8ND24 703 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 LAMB4A4D0S4 1761 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 ATP5JP18859 108 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 TFCP2Q12800 502 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 TNNI3KQ59H18 835 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 NECAB1Q8N987 351 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 FPGT-TNNI3KV9GXZ4 949 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
SMIM3-201ENST00000526627 CPDO75976 1380 aa24.39■■□□□ 1.5
SMIM3-201ENST00000526627 ATP5J2-PTCD1G3V325 749 aa24.39■■□□□ 1.5
SMIM3-201ENST00000526627 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.5
SMIM3-201ENST00000526627 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.39■■□□□ 1.5
SMIM3-201ENST00000526627 PARP4Q9UKK3 1724 aaKnown RBP24.39■■□□□ 1.49
SMIM3-201ENST00000526627 CABP4P57796 275 aa24.39■■□□□ 1.49
SMIM3-201ENST00000526627 PHF14O94880 888 aa24.38■■□□□ 1.49
SMIM3-201ENST00000526627 PSMA5P28066 241 aa24.38■■□□□ 1.49
SMIM3-201ENST00000526627 UBE2HP62256 183 aa24.38■■□□□ 1.49
SMIM3-201ENST00000526627 PLBD2Q8NHP8 589 aa24.38■■□□□ 1.49
SMIM3-201ENST00000526627 A0A087WZG4 1122 aa24.37■■□□□ 1.49
SMIM3-201ENST00000526627 TAF5LO75529 589 aa24.37■■□□□ 1.49
SMIM3-201ENST00000526627 NOL7Q9UMY1 257 aaKnown RBP24.37■■□□□ 1.49
SMIM3-201ENST00000526627 TSGA10IPQ3SY00 556 aa24.36■■□□□ 1.49
SMIM3-201ENST00000526627 ALDH8A1Q9H2A2 487 aaPredicted RBP24.36■■□□□ 1.49
SMIM3-201ENST00000526627 ATP6V1DQ9Y5K8 247 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms