RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 SURF6O75683 361 aaKnown RBP24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 GPTP24298 496 aa24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 FOXO4P98177 505 aa24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 NLRP10Q86W26 655 aa24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 NOP58Q9Y2X3 529 aaKnown RBP24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 C4AP0C0L4 1744 aa24.64■■□□□ 1.53
PPP1CA-204ENST00000526510 FAM161AQ3B820 660 aa24.63■■□□□ 1.53
PPP1CA-204ENST00000526510 ZNF34Q8IZ26 560 aa24.63■■□□□ 1.53
PPP1CA-204ENST00000526510 OTUD7AQ8TE49 926 aaPredicted RBP24.63■■□□□ 1.53
PPP1CA-204ENST00000526510 RBM19Q9Y4C8 960 aaKnown RBP24.63■■□□□ 1.53
PPP1CA-204ENST00000526510 SMIM5Q71RC9 77 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 PLEKHM2Q8IWE5 1019 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 LRRCC1Q9C099 1032 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 LRRC4BQ9NT99 713 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 PA2G4Q9UQ80 394 aaKnown RBP24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 TUBGCP6Q96RT7 1819 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 UBN2Q6ZU65 1347 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 UBR3Q6ZT12 1888 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 BCL11AQ9H165 835 aa24.62■■□□□ 1.53
PPP1CA-204ENST00000526510 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
PPP1CA-204ENST00000526510 ZBTB47Q9UFB7 747 aaPredicted RBP24.61■■□□□ 1.53
PPP1CA-204ENST00000526510 TNS1Q9HBL0 1735 aaKnown RBP24.6■■□□□ 1.53
PPP1CA-204ENST00000526510 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
PPP1CA-204ENST00000526510 RPS6KA4O75676 772 aa24.6■■□□□ 1.53
PPP1CA-204ENST00000526510 RFX5P48382 616 aaPredicted RBP24.6■■□□□ 1.53
PPP1CA-204ENST00000526510 ZBTB38Q8NAP3 1195 aaPredicted RBP24.6■■□□□ 1.53
PPP1CA-204ENST00000526510 AMIGO3Q86WK7 504 aa24.59■■□□□ 1.53
PPP1CA-204ENST00000526510 FAM89AQ96GI7 184 aa24.59■■□□□ 1.53
PPP1CA-204ENST00000526510 LMBR1LQ6UX01 489 aa24.59■■□□□ 1.53
PPP1CA-204ENST00000526510 SYNE4Q8N205 404 aa24.59■■□□□ 1.53
PPP1CA-204ENST00000526510 RHPN1Q8TCX5 695 aa24.59■■□□□ 1.53
PPP1CA-204ENST00000526510 SALL3Q9BXA9 1300 aa24.58■■□□□ 1.53
PPP1CA-204ENST00000526510 DDX60Q8IY21 1712 aaKnown RBP24.58■■□□□ 1.53
PPP1CA-204ENST00000526510 KLHDC4Q8TBB5 520 aa24.58■■□□□ 1.53
PPP1CA-204ENST00000526510 LAMB2P55268 1798 aa24.57■■□□□ 1.52
PPP1CA-204ENST00000526510 CASZ1Q86V15 1759 aa24.57■■□□□ 1.52
PPP1CA-204ENST00000526510 GNPATO15228 680 aa24.57■■□□□ 1.52
PPP1CA-204ENST00000526510 CDHR2Q9BYE9 1310 aa24.57■■□□□ 1.52
PPP1CA-204ENST00000526510 HSP90AB4PQ58FF6 505 aa24.56■■□□□ 1.52
PPP1CA-204ENST00000526510 IL1RAPL2Q9NP60 686 aa24.56■■□□□ 1.52
PPP1CA-204ENST00000526510 KIF1BPQ96EK5 621 aa24.56■■□□□ 1.52
PPP1CA-204ENST00000526510 PLA2G12BQ9BX93 195 aa24.56■■□□□ 1.52
PPP1CA-204ENST00000526510 PTPN12Q05209 780 aaKnown RBP24.55■■□□□ 1.52
PPP1CA-204ENST00000526510 COPRSQ9NQ92 184 aa24.55■■□□□ 1.52
PPP1CA-204ENST00000526510 BMP2KLQ5H9B9 411 aa24.54■■□□□ 1.52
PPP1CA-204ENST00000526510 SUSD4Q5VX71 490 aa24.54■■□□□ 1.52
PPP1CA-204ENST00000526510 SLC27A3Q5K4L6 730 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 PROM2Q8N271 834 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 SIL1Q9H173 461 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 BCL2L12Q9HB09 334 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 TRMT112Q9UI30 125 aaKnown RBP24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 RTCBQ9Y3I0 505 aaKnown RBP24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 COL24A1Q17RW2 1714 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 SASH1O94885 1247 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 GSPT1P15170 499 aaKnown RBP24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 OS9Q13438 667 aaPredicted RBP24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 CLEC4GQ6UXB4 293 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 NARFQ9UHQ1 456 aa24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.53■■□□□ 1.52
PPP1CA-204ENST00000526510 PDE1AP54750 535 aa24.52■■□□□ 1.52
PPP1CA-204ENST00000526510 OSBPL3Q9H4L5 887 aa24.52■■□□□ 1.52
PPP1CA-204ENST00000526510 SRP68Q9UHB9 627 aaKnown RBP24.52■■□□□ 1.52
PPP1CA-204ENST00000526510 NIP7Q9Y221 180 aaKnown RBP eCLIP24.52■■□□□ 1.52
PPP1CA-204ENST00000526510 G3BP1Q13283 466 aaKnown RBP eCLIP24.51■■□□□ 1.515e-6■■■■□ 22.5
PPP1CA-204ENST00000526510 TTC22Q5TAA0 569 aa24.51■■□□□ 1.51
PPP1CA-204ENST00000526510 ARHGEF1Q92888 912 aaKnown RBP24.51■■□□□ 1.51
PPP1CA-204ENST00000526510 ZNF652Q9Y2D9 606 aa24.51■■□□□ 1.51
PPP1CA-204ENST00000526510 CHMP3Q9Y3E7 222 aa24.51■■□□□ 1.51
PPP1CA-204ENST00000526510 IRS4O14654 1257 aaPredicted RBP24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 RGL2O15211 777 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 CSF1RP07333 972 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 PARP10Q53GL7 1025 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 USPL1Q5W0Q7 1092 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 ERC1Q8IUD2 1116 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 TXNRD1Q16881 649 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 AK7Q96M32 723 aa24.5■■□□□ 1.51
PPP1CA-204ENST00000526510 NTSR2O95665 410 aa24.49■■□□□ 1.51
PPP1CA-204ENST00000526510 MX1P20591 662 aa24.49■■□□□ 1.51
PPP1CA-204ENST00000526510 NUTM1Q86Y26 1132 aa24.49■■□□□ 1.51
PPP1CA-204ENST00000526510 STAP2Q9UGK3 403 aa24.49■■□□□ 1.51
PPP1CA-204ENST00000526510 AK9Q5TCS8 1911 aa24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 FAM177BA6PVY3 158 aa24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 PLSCR1O15162 318 aa24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 SEC24BO95487 1268 aa24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 TSHZ3Q63HK5 1081 aa24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 UTP14AQ9BVJ6 771 aaKnown RBP24.48■■□□□ 1.51
PPP1CA-204ENST00000526510 PHF14O94880 888 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 APBA3O96018 575 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 TTLL11Q8NHH1 800 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 SH3TC1Q8TE82 1336 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 CTSWP56202 376 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 TRAPPC3LQ5T215 181 aa24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 ZNF594Q96JF6 807 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-204ENST00000526510 USP42Q9H9J4 1324 aaKnown RBP24.45■■□□□ 1.5
PPP1CA-204ENST00000526510 PDE8AO60658 829 aa24.45■■□□□ 1.5
PPP1CA-204ENST00000526510 ZPR1O75312 459 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms