RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
CCS-204ENST00000526066 GTF2E1P29083 439 aaPredicted RBP22.27■■□□□ 1.16
CCS-204ENST00000526066 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
CCS-204ENST00000526066 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
CCS-204ENST00000526066 NIP7Q9Y221 180 aaKnown RBP eCLIP22.27■■□□□ 1.16
CCS-204ENST00000526066 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCS-204ENST00000526066 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
CCS-204ENST00000526066 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
CCS-204ENST00000526066 POTEJP0CG39 1038 aa22.25■■□□□ 1.15
CCS-204ENST00000526066 EAPPQ56P03 285 aaPredicted RBP22.25■■□□□ 1.15
CCS-204ENST00000526066 RTKN2Q8IZC4 609 aa22.25■■□□□ 1.15
CCS-204ENST00000526066 AIDAQ96BJ3 306 aa22.25■■□□□ 1.15
CCS-204ENST00000526066 L3MBTL3Q96JM7 780 aaPredicted RBP22.25■■□□□ 1.15
CCS-204ENST00000526066 RGL2O15211 777 aa22.24■■□□□ 1.15
CCS-204ENST00000526066 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
CCS-204ENST00000526066 TAF1DQ9H5J8 278 aaPredicted RBP22.24■■□□□ 1.15
CCS-204ENST00000526066 CLEC11AQ9Y240 323 aa22.24■■□□□ 1.15
CCS-204ENST00000526066 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
CCS-204ENST00000526066 ALDH1B1P30837 517 aa22.23■■□□□ 1.15
CCS-204ENST00000526066 HACL1Q9UJ83 578 aa22.23■■□□□ 1.15
CCS-204ENST00000526066 CNTNAP1P78357 1384 aa22.23■■□□□ 1.15
CCS-204ENST00000526066 C7orf43Q8WVR3 580 aa22.22■■□□□ 1.15
CCS-204ENST00000526066 ZNF277Q9NRM2 450 aaPredicted RBP22.22■■□□□ 1.15
CCS-204ENST00000526066 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
CCS-204ENST00000526066 TMEM88BA6NKF7 163 aa22.21■■□□□ 1.15
CCS-204ENST00000526066 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
CCS-204ENST00000526066 KLRG2A4D1S0 409 aaPredicted RBP22.19■■□□□ 1.14
CCS-204ENST00000526066 HOXB7P09629 217 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 EPHX2P34913 555 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
CCS-204ENST00000526066 JDP2Q8WYK2 163 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 NYXQ9GZU5 481 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 PASKQ96RG2 1323 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 ZNF541Q9H0D2 1346 aa22.19■■□□□ 1.14
CCS-204ENST00000526066 LAMB4A4D0S4 1761 aa22.18■■□□□ 1.14
CCS-204ENST00000526066 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
CCS-204ENST00000526066 IARSP41252 1262 aaKnown RBP22.18■■□□□ 1.14
CCS-204ENST00000526066 C8orf58Q8NAV2 365 aa22.18■■□□□ 1.14
CCS-204ENST00000526066 NBPF26B4DH59 902 aa22.17■■□□□ 1.14
CCS-204ENST00000526066 CTCFP49711 727 aaPredicted RBP22.17■■□□□ 1.14
CCS-204ENST00000526066 NBPF10Q6P3W6 841 aaKnown RBP22.17■■□□□ 1.14
CCS-204ENST00000526066 NBPF15Q8N660 670 aa22.17■■□□□ 1.14
CCS-204ENST00000526066 FOXN1O15353 648 aa22.16■■□□□ 1.14
CCS-204ENST00000526066 KRT24Q2M2I5 525 aa22.16■■□□□ 1.14
CCS-204ENST00000526066 GPC2Q8N158 579 aa22.16■■□□□ 1.14
CCS-204ENST00000526066 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
CCS-204ENST00000526066 RPGRQ92834 1020 aaKnown RBP22.16■■□□□ 1.14
CCS-204ENST00000526066 PRDM10Q9NQV6 1147 aa22.16■■□□□ 1.14
CCS-204ENST00000526066 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
CCS-204ENST00000526066 LMOD1P29536 600 aaPredicted RBP22.15■■□□□ 1.14
CCS-204ENST00000526066 EIF6P56537 245 aaKnown RBP22.15■■□□□ 1.14
CCS-204ENST00000526066 TWISTNBQ3B726 338 aaPredicted RBP22.15■■□□□ 1.14
CCS-204ENST00000526066 CC2D2BQ6DHV5 1058 aa22.15■■□□□ 1.14
CCS-204ENST00000526066 KIF6Q6ZMV9 814 aa22.15■■□□□ 1.14
CCS-204ENST00000526066 VEGFBP49765 207 aa22.14■■□□□ 1.13
CCS-204ENST00000526066 OLFM4Q6UX06 510 aa22.14■■□□□ 1.13
CCS-204ENST00000526066 TSPYL6Q8N831 410 aa22.14■■□□□ 1.13
CCS-204ENST00000526066 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
CCS-204ENST00000526066 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.13
CCS-204ENST00000526066 VAMP4O75379 141 aa22.13■■□□□ 1.13
CCS-204ENST00000526066 ITGBL1O95965 494 aaPredicted RBP22.13■■□□□ 1.13
CCS-204ENST00000526066 HLFQ16534 295 aa22.13■■□□□ 1.13
CCS-204ENST00000526066 CNTROBQ8N137 903 aa22.13■■□□□ 1.13
CCS-204ENST00000526066 PSMD1Q99460 953 aa22.13■■□□□ 1.13
CCS-204ENST00000526066 TMX4Q9H1E5 349 aaPredicted RBP22.13■■□□□ 1.13
CCS-204ENST00000526066 FZD9O00144 591 aa22.12■■□□□ 1.13
CCS-204ENST00000526066 GRIPAP1Q4V328 841 aa22.12■■□□□ 1.13
CCS-204ENST00000526066 ABT1Q9ULW3 272 aaKnown RBP22.12■■□□□ 1.13
CCS-204ENST00000526066 GJA3Q9Y6H8 435 aa22.12■■□□□ 1.13
CCS-204ENST00000526066 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
CCS-204ENST00000526066 ELL2O00472 640 aaPredicted RBP22.11■■□□□ 1.13
CCS-204ENST00000526066 DEFB115Q30KQ5 88 aa22.11■■□□□ 1.13
CCS-204ENST00000526066 MAP1SQ66K74 1059 aaPredicted RBP22.11■■□□□ 1.13
CCS-204ENST00000526066 ADAMTSL1Q8N6G6 1762 aa22.11■■□□□ 1.13
CCS-204ENST00000526066 NUP98P52948 1817 aa22.1■■□□□ 1.13
CCS-204ENST00000526066 CRY2Q49AN0 593 aa22.1■■□□□ 1.13
CCS-204ENST00000526066 NUTM1Q86Y26 1132 aa22.1■■□□□ 1.13
CCS-204ENST00000526066 MAP3K15Q6ZN16 1313 aa22.09■■□□□ 1.13
CCS-204ENST00000526066 LARGE2Q8N3Y3 721 aa22.09■■□□□ 1.13
CCS-204ENST00000526066 ABCC12Q96J65 1359 aa22.09■■□□□ 1.13
CCS-204ENST00000526066 RASSF10A6NK89 507 aa22.08■■□□□ 1.13
CCS-204ENST00000526066 MAP2K1Q02750 393 aaPredicted RBP22.08■■□□□ 1.13
CCS-204ENST00000526066 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.13
CCS-204ENST00000526066 RBM17Q96I25 401 aaKnown RBP22.08■■□□□ 1.13
CCS-204ENST00000526066 MYL6BP14649 208 aa22.07■■□□□ 1.12
CCS-204ENST00000526066 GPTP24298 496 aa22.07■■□□□ 1.12
CCS-204ENST00000526066 CCDC30Q5VVM6 783 aa22.07■■□□□ 1.12
CCS-204ENST00000526066 PAXIP1Q6ZW49 1069 aaPredicted RBP22.07■■□□□ 1.12
CCS-204ENST00000526066 WBP1LQ9NX94 342 aa22.07■■□□□ 1.12
CCS-204ENST00000526066 IBTKQ9P2D0 1353 aaPredicted RBP22.07■■□□□ 1.12
CCS-204ENST00000526066 ERBB4Q15303 1308 aa22.06■■□□□ 1.12
CCS-204ENST00000526066 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
CCS-204ENST00000526066 LBX1P52954 281 aa22.06■■□□□ 1.12
CCS-204ENST00000526066 BEGAINQ9BUH8 593 aa22.06■■□□□ 1.12
CCS-204ENST00000526066 ZBTB3Q9H5J0 574 aa22.06■■□□□ 1.12
CCS-204ENST00000526066 PPEF1O14829 653 aaPredicted RBP22.05■■□□□ 1.12
CCS-204ENST00000526066 EIF2S2P20042 333 aaKnown RBP22.05■■□□□ 1.12
CCS-204ENST00000526066 HOXA10P31260 410 aaPredicted RBP22.05■■□□□ 1.12
CCS-204ENST00000526066 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
CCS-204ENST00000526066 NIM1KQ8IY84 436 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 379.3 ms