RNA–Protein interactions for RNA: ENST00000525939.1

ABCA7-208, Transcript of ATP binding cassette subfamily A member 7, human

TSL 3

Gene ABCA7, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-208	ENST00000525939	NUTM1	Q86Y26	1132 aa		28.59	■■■□□ 2.17
ABCA7-208	ENST00000525939	CNKSR1	Q969H4	720 aa		28.59	■■■□□ 2.17
ABCA7-208	ENST00000525939	ISCA1	Q9BUE6	129 aa		28.59	■■■□□ 2.17
ABCA7-208	ENST00000525939	UTP14A	Q9BVJ6	771 aa	Known RBP	28.59	■■■□□ 2.17
ABCA7-208	ENST00000525939	STK31	Q9BXU1	1019 aa		28.59	■■■□□ 2.17
ABCA7-208	ENST00000525939	TRIM28	Q13263	835 aa	Known RBP	28.58	■■■□□ 2.17
ABCA7-208	ENST00000525939	CRY2	Q49AN0	593 aa		28.58	■■■□□ 2.17
ABCA7-208	ENST00000525939	SLC10A5	Q5PT55	438 aa		28.58	■■■□□ 2.17
ABCA7-208	ENST00000525939	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.58	■■■□□ 2.17
ABCA7-208	ENST00000525939	NPR1	P16066	1061 aa		28.57	■■■□□ 2.16
ABCA7-208	ENST00000525939	FER1L6	Q2WGJ9	1857 aa		28.56	■■■□□ 2.16
ABCA7-208	ENST00000525939	ARHGAP27	Q6ZUM4	889 aa		28.56	■■■□□ 2.16
ABCA7-208	ENST00000525939	ADCY9	O60503	1353 aa		28.55	■■■□□ 2.16
ABCA7-208	ENST00000525939	DDX58	O95786	925 aa	Known RBP	28.55	■■■□□ 2.16
ABCA7-208	ENST00000525939	RIC3	Q7Z5B4	369 aa		28.55	■■■□□ 2.16
ABCA7-208	ENST00000525939	LAMB2	P55268	1798 aa		28.55	■■■□□ 2.16
ABCA7-208	ENST00000525939		E9PSI1	815 aa		28.54	■■■□□ 2.16
ABCA7-208	ENST00000525939	SLC4A2	P04920	1241 aa		28.53	■■■□□ 2.16
ABCA7-208	ENST00000525939	DDX60	Q8IY21	1712 aa	Known RBP	28.52	■■■□□ 2.16
ABCA7-208	ENST00000525939	CCDC88A	Q3V6T2	1871 aa		28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	SH3TC1	Q8TE82	1336 aa		28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	HOXA10	P31260	410 aa	Predicted RBP	28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	SLFN5	Q08AF3	891 aa		28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	PRPF40B	Q6NWY9	871 aa	Known RBP	28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	KSR2	Q6VAB6	950 aa		28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.51	■■■□□ 2.15
ABCA7-208	ENST00000525939	ALDH1B1	P30837	517 aa		28.5	■■■□□ 2.15
ABCA7-208	ENST00000525939	METTL22	Q9BUU2	404 aa	Predicted RBP	28.5	■■■□□ 2.15
ABCA7-208	ENST00000525939	TRMT112	Q9UI30	125 aa	Known RBP	28.5	■■■□□ 2.15
ABCA7-208	ENST00000525939	SOGA3	Q5TF21	947 aa		28.49	■■■□□ 2.15
ABCA7-208	ENST00000525939	C7orf43	Q8WVR3	580 aa		28.49	■■■□□ 2.15
ABCA7-208	ENST00000525939	NLRP3	Q96P20	1036 aa		28.49	■■■□□ 2.15
ABCA7-208	ENST00000525939	ATP5J2-PTCD1	G3V325	749 aa		28.48	■■■□□ 2.15
ABCA7-208	ENST00000525939	TCERG1	O14776	1098 aa	Known RBP	28.48	■■■□□ 2.15
ABCA7-208	ENST00000525939	G2E3	Q7L622	706 aa		28.48	■■■□□ 2.15
ABCA7-208	ENST00000525939	TRMT2A	Q8IZ69	625 aa	Known RBP	28.48	■■■□□ 2.15
ABCA7-208	ENST00000525939	DICER1	Q9UPY3	1922 aa	Known RBP	28.47	■■■□□ 2.15
ABCA7-208	ENST00000525939	PI4KAP2	A4QPH2	592 aa		28.47	■■■□□ 2.15
ABCA7-208	ENST00000525939	FLII	Q13045	1269 aa		28.47	■■■□□ 2.15
ABCA7-208	ENST00000525939	PI4KAP1	Q8N8J0	262 aa		28.47	■■■□□ 2.15
ABCA7-208	ENST00000525939	CCDC191	Q8NCU4	936 aa		28.47	■■■□□ 2.15
ABCA7-208	ENST00000525939	C21orf2	O43822	256 aa		28.46	■■■□□ 2.15
ABCA7-208	ENST00000525939	CRAMP1	Q96RY5	1269 aa		28.46	■■■□□ 2.15
ABCA7-208	ENST00000525939	MYD88	Q99836	296 aa		28.46	■■■□□ 2.15
ABCA7-208	ENST00000525939	MAP3K2	Q9Y2U5	619 aa		28.46	■■■□□ 2.15
ABCA7-208	ENST00000525939	C3orf67	Q6ZVT6	689 aa		28.45	■■■□□ 2.14
ABCA7-208	ENST00000525939	RPGR	Q92834	1020 aa	Known RBP	28.45	■■■□□ 2.14
ABCA7-208	ENST00000525939	LTBP3	Q9NS15	1303 aa		28.44	■■■□□ 2.14
ABCA7-208	ENST00000525939	NFKBIE	O00221	500 aa		28.44	■■■□□ 2.14
ABCA7-208	ENST00000525939	SYNE4	Q8N205	404 aa		28.44	■■■□□ 2.14
ABCA7-208	ENST00000525939	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.43	■■■□□ 2.14
ABCA7-208	ENST00000525939	RBM17	Q96I25	401 aa	Known RBP	28.43	■■■□□ 2.14
ABCA7-208	ENST00000525939	HCLS1	P14317	486 aa	Predicted RBP	28.42	■■■□□ 2.14
ABCA7-208	ENST00000525939	C9orf131	Q5VYM1	1079 aa		28.42	■■■□□ 2.14
ABCA7-208	ENST00000525939	ZNF428	Q96B54	188 aa		28.42	■■■□□ 2.14
ABCA7-208	ENST00000525939	FAM89A	Q96GI7	184 aa		28.42	■■■□□ 2.14
ABCA7-208	ENST00000525939	CDCA7L	Q96GN5	454 aa		28.41	■■■□□ 2.14
ABCA7-208	ENST00000525939	CWC25	Q9NXE8	425 aa	Predicted RBP	28.41	■■■□□ 2.14
ABCA7-208	ENST00000525939	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.41	■■■□□ 2.14
ABCA7-208	ENST00000525939	PCCA	P05165	728 aa	Predicted RBP	28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	IGKV5-2	P06315	115 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	LMNB1	P20700	586 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	RASSF7	Q02833	373 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	NEXN	Q0ZGT2	675 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	FKBP5	Q13451	457 aa	Predicted RBP	28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	CCDC93	Q567U6	631 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	SNED1	Q8TER0	1413 aa		28.4	■■■□□ 2.14
ABCA7-208	ENST00000525939	HSP90B1	P14625	803 aa	Known RBP	28.39	■■■□□ 2.14
ABCA7-208	ENST00000525939	SF3B3	Q15393	1217 aa	Known RBP	28.39	■■■□□ 2.14
ABCA7-208	ENST00000525939	CC2D2B	Q6DHV5	1058 aa		28.39	■■■□□ 2.14
ABCA7-208	ENST00000525939	MYH3	P11055	1940 aa		28.38	■■■□□ 2.13
ABCA7-208	ENST00000525939	PRELP	P51888	382 aa		28.38	■■■□□ 2.13
ABCA7-208	ENST00000525939	RNF181	Q9P0P0	153 aa		28.38	■■■□□ 2.13
ABCA7-208	ENST00000525939	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.38	■■■□□ 2.13
ABCA7-208	ENST00000525939	IRS4	O14654	1257 aa	Predicted RBP	28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	GRIPAP1	Q4V328	841 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	RTKN2	Q8IZC4	609 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	DNAAF4	Q8WXU2	420 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	TAOK3	Q9H2K8	898 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	TAF1	P21675	1872 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	TIAM2	Q8IVF5	1701 aa		28.37	■■■□□ 2.13
ABCA7-208	ENST00000525939	NEURL1B	A8MQ27	555 aa		28.36	■■■□□ 2.13
ABCA7-208	ENST00000525939	CT47B1	P0C2W7	299 aa	Predicted RBP	28.36	■■■□□ 2.13
ABCA7-208	ENST00000525939	ABCC4	O15439	1325 aa		28.36	■■■□□ 2.13
ABCA7-208	ENST00000525939	CDHR2	Q9BYE9	1310 aa		28.36	■■■□□ 2.13
ABCA7-208	ENST00000525939	LINS1	Q8NG48	757 aa		28.34	■■■□□ 2.13
ABCA7-208	ENST00000525939	BBOX1	O75936	387 aa		28.33	■■■□□ 2.13
ABCA7-208	ENST00000525939	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.33	■■■□□ 2.13
ABCA7-208	ENST00000525939	DDX46	Q7L014	1031 aa	Known RBP	28.33	■■■□□ 2.13
ABCA7-208	ENST00000525939	PPEF1	O14829	653 aa	Predicted RBP	28.32	■■■□□ 2.12
ABCA7-208	ENST00000525939	CWF19L2	Q2TBE0	894 aa	Known RBP	28.32	■■■□□ 2.12
ABCA7-208	ENST00000525939	ALDH1L2	Q3SY69	923 aa		28.32	■■■□□ 2.12
ABCA7-208	ENST00000525939	PSMD1	Q99460	953 aa		28.32	■■■□□ 2.12
ABCA7-208	ENST00000525939	LRRC37A	A6NMS7	1700 aa		28.32	■■■□□ 2.12
ABCA7-208	ENST00000525939	PDE8A	O60658	829 aa		28.31	■■■□□ 2.12
ABCA7-208	ENST00000525939	GRAP	Q13588	217 aa		28.31	■■■□□ 2.12
ABCA7-208	ENST00000525939	RTL5	Q5HYW3	569 aa	Predicted RBP	28.31	■■■□□ 2.12
ABCA7-208	ENST00000525939	OLFM4	Q6UX06	510 aa		28.31	■■■□□ 2.12
ABCA7-208	ENST00000525939	MRPL50	Q8N5N7	158 aa	Known RBP	28.31	■■■□□ 2.12
ABCA7-208	ENST00000525939	GRAPL	Q8TC17	118 aa	Predicted RBP	28.31	■■■□□ 2.12

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