RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
SSH3-204ENST00000525913 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
SSH3-204ENST00000525913 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
SSH3-204ENST00000525913 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
SSH3-204ENST00000525913 PANK3Q9H999 370 aa9.57□□□□□ -0.88
SSH3-204ENST00000525913 RNF186Q9NXI6 227 aa9.57□□□□□ -0.88
SSH3-204ENST00000525913 PRAMEF22A3QJZ6 481 aa9.56□□□□□ -0.88
SSH3-204ENST00000525913 CXCL9Q07325 125 aa9.56□□□□□ -0.88
SSH3-204ENST00000525913 HLFQ16534 295 aa9.56□□□□□ -0.88
SSH3-204ENST00000525913 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
SSH3-204ENST00000525913 ZC3H15Q8WU90 426 aaKnown RBP9.56□□□□□ -0.88
SSH3-204ENST00000525913 SAGE1Q9NXZ1 904 aa9.56□□□□□ -0.88
SSH3-204ENST00000525913 NIP7Q9Y221 180 aaKnown RBP eCLIP9.56□□□□□ -0.88
SSH3-204ENST00000525913 NUP98P52948 1817 aa9.55□□□□□ -0.88
SSH3-204ENST00000525913 RGL2O15211 777 aa9.55□□□□□ -0.88
SSH3-204ENST00000525913 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SSH3-204ENST00000525913 KIF23Q02241 960 aaPredicted RBP9.55□□□□□ -0.88
SSH3-204ENST00000525913 HABP4Q5JVS0 413 aaKnown RBP9.55□□□□□ -0.88
SSH3-204ENST00000525913 CDC37L1Q7L3B6 337 aa9.55□□□□□ -0.88
SSH3-204ENST00000525913 MORC1Q86VD1 984 aa9.55□□□□□ -0.88
SSH3-204ENST00000525913 FMNL2Q96PY5 1086 aa9.55□□□□□ -0.88
SSH3-204ENST00000525913 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 NBPF26B4DH59 902 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 TRPA1O75762 1119 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 HUNKP57058 714 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 RGMBQ6NW40 437 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
SSH3-204ENST00000525913 CTU1Q7Z7A3 348 aaKnown RBP9.54□□□□□ -0.88
SSH3-204ENST00000525913 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 CSRNP1Q96S65 589 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 ZNF408Q9H9D4 720 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 HPS5Q9UPZ3 1129 aa9.54□□□□□ -0.88
SSH3-204ENST00000525913 SHTN1A0MZ66 631 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 GMPSP49915 693 aaPredicted RBP9.53□□□□□ -0.88
SSH3-204ENST00000525913 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
SSH3-204ENST00000525913 NIM1KQ8IY84 436 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 TRPM4Q8TD43 1214 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 VPS33BQ9H267 617 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
SSH3-204ENST00000525913 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.88
SSH3-204ENST00000525913 ABCC12Q96J65 1359 aa9.52□□□□□ -0.88
SSH3-204ENST00000525913 GNAT3A8MTJ3 354 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 TEFQ10587 303 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 AOC3Q16853 763 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 CRAMP1Q96RY5 1269 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 ZNRF3Q9ULT6 936 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
SSH3-204ENST00000525913 BTBD11A6QL63 1104 aa9.51□□□□□ -0.89
SSH3-204ENST00000525913 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
SSH3-204ENST00000525913 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
SSH3-204ENST00000525913 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
SSH3-204ENST00000525913 RTFDC1Q9BY42 306 aaPredicted RBP9.51□□□□□ -0.89
SSH3-204ENST00000525913 CNOT7Q9UIV1 285 aaKnown RBP9.51□□□□□ -0.89
SSH3-204ENST00000525913 RIC1Q4ADV7 1423 aa9.5□□□□□ -0.89
SSH3-204ENST00000525913 YDJCA8MPS7 323 aa9.5□□□□□ -0.89
SSH3-204ENST00000525913 TCERG1O14776 1098 aaKnown RBP9.5□□□□□ -0.89
SSH3-204ENST00000525913 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.89
SSH3-204ENST00000525913 CDHR2Q9BYE9 1310 aa9.5□□□□□ -0.89
SSH3-204ENST00000525913 CENPFP49454 3210 aa9.5□□□□□ -0.89
SSH3-204ENST00000525913 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 PPEF1O14829 653 aaPredicted RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 RAD17O75943 681 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 EGFRP00533 1210 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 SLC10A3P09131 477 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 SNRPA1P09661 255 aaKnown RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 GTF2E1P29083 439 aaPredicted RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 PKN2Q16513 984 aaKnown RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 RPGRQ92834 1020 aaKnown RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 NYXQ9GZU5 481 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 GBA2Q9HCG7 927 aaPredicted RBP9.49□□□□□ -0.89
SSH3-204ENST00000525913 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 TAF1P21675 1872 aa9.49□□□□□ -0.89
SSH3-204ENST00000525913 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 SAMD7Q7Z3H4 446 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 GAS2L2Q8NHY3 880 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 RBM17Q96I25 401 aaKnown RBP9.48□□□□□ -0.89
SSH3-204ENST00000525913 BCL2L13Q9BXK5 485 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 UBN2Q6ZU65 1347 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 BRCA2P51587 3418 aa9.48□□□□□ -0.89
SSH3-204ENST00000525913 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 H7C1D1 291 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 ZNF296Q8WUU4 475 aaPredicted RBP9.47□□□□□ -0.89
SSH3-204ENST00000525913 DPF2Q92785 391 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 PHACTR3Q96KR7 559 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
SSH3-204ENST00000525913 HTTP42858 3142 aa9.47□□□□□ -0.89
SSH3-204ENST00000525913 LAMB2P55268 1798 aa9.46□□□□□ -0.9
SSH3-204ENST00000525913 ADM5C9JUS6 153 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms