RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
HIF3A-209ENST00000525854 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
HIF3A-209ENST00000525854 GNAI1P63096 354 aa15.11■□□□□ 0.01
HIF3A-209ENST00000525854 FKBP4Q02790 459 aaKnown RBP eCLIP15.11■□□□□ 0.01
HIF3A-209ENST00000525854 CC2D2BQ6DHV5 1058 aa15.11■□□□□ 0.01
HIF3A-209ENST00000525854 RBM17Q96I25 401 aaKnown RBP15.11■□□□□ 0.01
HIF3A-209ENST00000525854 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
HIF3A-209ENST00000525854 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
HIF3A-209ENST00000525854 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 GRIPAP1Q4V328 841 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 ARFGEF2Q9Y6D5 1785 aa15.1■□□□□ 0.01
HIF3A-209ENST00000525854 TNRC6CQ9HCJ0 1690 aaKnown RBP15.09■□□□□ 0.01
HIF3A-209ENST00000525854 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 SLC10A5Q5PT55 438 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 PLBD2Q8NHP8 589 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 HYPKQ9NX55 129 aa15.09■□□□□ 0.01
HIF3A-209ENST00000525854 ANP32CO43423 234 aa15.08■□□□□ 0
HIF3A-209ENST00000525854 NLRP10Q86W26 655 aa15.08■□□□□ 0
HIF3A-209ENST00000525854 TMX4Q9H1E5 349 aaPredicted RBP15.08■□□□□ 0
HIF3A-209ENST00000525854 TIAM2Q8IVF5 1701 aa15.07■□□□□ 0
HIF3A-209ENST00000525854 OLFM4Q6UX06 510 aa15.07■□□□□ 0
HIF3A-209ENST00000525854 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
HIF3A-209ENST00000525854 PSMD1Q99460 953 aa15.07■□□□□ 0
HIF3A-209ENST00000525854 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
HIF3A-209ENST00000525854 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
HIF3A-209ENST00000525854 CCDC184Q52MB2 194 aa15.06■□□□□ 0
HIF3A-209ENST00000525854 SYNE4Q8N205 404 aa15.06■□□□□ 0
HIF3A-209ENST00000525854 TRMT112Q9UI30 125 aaKnown RBP15.06■□□□□ 0
HIF3A-209ENST00000525854 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
HIF3A-209ENST00000525854 CACNA1SQ13698 1873 aa15.06■□□□□ 0
HIF3A-209ENST00000525854 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
HIF3A-209ENST00000525854 IARSP41252 1262 aaKnown RBP15.05■□□□□ -0
HIF3A-209ENST00000525854 CCDC27Q2M243 656 aa15.05■□□□□ -0
HIF3A-209ENST00000525854 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
HIF3A-209ENST00000525854 MRS2Q9HD23 443 aa15.05■□□□□ -0
HIF3A-209ENST00000525854 DICER1Q9UPY3 1922 aaKnown RBP15.04■□□□□ -0
HIF3A-209ENST00000525854 IQCA1LA6NCM1 817 aa15.04■□□□□ -0
HIF3A-209ENST00000525854 POTECB2RU33 542 aa15.04■□□□□ -0
HIF3A-209ENST00000525854 DDNO94850 711 aaPredicted RBP15.04■□□□□ -0
HIF3A-209ENST00000525854 GOLGA2Q08379 1002 aa15.04■□□□□ -0
HIF3A-209ENST00000525854 JDP2Q8WYK2 163 aa15.04■□□□□ -0
HIF3A-209ENST00000525854 WDR90Q96KV7 1748 aa15.03■□□□□ -0
HIF3A-209ENST00000525854 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
HIF3A-209ENST00000525854 BBOX1O75936 387 aa15.03■□□□□ -0
HIF3A-209ENST00000525854 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
HIF3A-209ENST00000525854 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
HIF3A-209ENST00000525854 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
HIF3A-209ENST00000525854 ISCA1Q9BUE6 129 aa15.03■□□□□ -0
HIF3A-209ENST00000525854 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
HIF3A-209ENST00000525854 SNED1Q8TER0 1413 aa15.02■□□□□ -0
HIF3A-209ENST00000525854 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
HIF3A-209ENST00000525854 TRIM28Q13263 835 aaKnown RBP15.02■□□□□ -0
HIF3A-209ENST00000525854 CCDC30Q5VVM6 783 aa15.02■□□□□ -0
HIF3A-209ENST00000525854 DDX46Q7L014 1031 aaKnown RBP15.02■□□□□ -0
HIF3A-209ENST00000525854 RIC3Q7Z5B4 369 aa15.02■□□□□ -0
HIF3A-209ENST00000525854 C8orf58Q8NAV2 365 aa15.02■□□□□ -0
HIF3A-209ENST00000525854 CEP350Q5VT06 3117 aa15.02□□□□□ -0.01
HIF3A-209ENST00000525854 ABCC4O15439 1325 aa15.01□□□□□ -0.01
HIF3A-209ENST00000525854 ATP5J2-PTCD1G3V325 749 aa15.01□□□□□ -0.01
HIF3A-209ENST00000525854 FZD9O00144 591 aa15.01□□□□□ -0.01
HIF3A-209ENST00000525854 WWC1Q8IX03 1113 aa15.01□□□□□ -0.01
HIF3A-209ENST00000525854 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
HIF3A-209ENST00000525854 IL16Q14005 1332 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 ZNF541Q9H0D2 1346 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 DDX58O95786 925 aaKnown RBP15□□□□□ -0.01
HIF3A-209ENST00000525854 HSP90B1P14625 803 aaKnown RBP15□□□□□ -0.01
HIF3A-209ENST00000525854 EIF6P56537 245 aaKnown RBP15□□□□□ -0.01
HIF3A-209ENST00000525854 GRAPQ13588 217 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 TMC4Q7Z404 712 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 SP8Q8IXZ3 490 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 LARGE2Q8N3Y3 721 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 GRAPLQ8TC17 118 aaPredicted RBP15□□□□□ -0.01
HIF3A-209ENST00000525854 VPS33BQ9H267 617 aa15□□□□□ -0.01
HIF3A-209ENST00000525854 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
HIF3A-209ENST00000525854 GPC2Q8N158 579 aa14.99□□□□□ -0.01
HIF3A-209ENST00000525854 FAM89AQ96GI7 184 aa14.99□□□□□ -0.01
HIF3A-209ENST00000525854 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
HIF3A-209ENST00000525854 HACL1Q9UJ83 578 aa14.99□□□□□ -0.01
HIF3A-209ENST00000525854 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
HIF3A-209ENST00000525854 DPP8Q6V1X1 898 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-209ENST00000525854 NIM1KQ8IY84 436 aa14.98□□□□□ -0.01
HIF3A-209ENST00000525854 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
HIF3A-209ENST00000525854 STK31Q9BXU1 1019 aa14.98□□□□□ -0.01
HIF3A-209ENST00000525854 TAF1DQ9H5J8 278 aaPredicted RBP14.98□□□□□ -0.01
HIF3A-209ENST00000525854 IRS4O14654 1257 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-209ENST00000525854 SF3B3Q15393 1217 aaKnown RBP14.97□□□□□ -0.01
HIF3A-209ENST00000525854 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
HIF3A-209ENST00000525854 MPNDQ8N594 471 aa14.97□□□□□ -0.01
HIF3A-209ENST00000525854 TSPYL6Q8N831 410 aa14.97□□□□□ -0.01
HIF3A-209ENST00000525854 ZBTB38Q8NAP3 1195 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-209ENST00000525854 CCDC191Q8NCU4 936 aa14.97□□□□□ -0.01
HIF3A-209ENST00000525854 RTFDC1Q9BY42 306 aaPredicted RBP14.97□□□□□ -0.01
HIF3A-209ENST00000525854 EPHX2P34913 555 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms