RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 MRS2Q9HD23 443 aa26.01■■□□□ 1.75
TM9SF1-204ENST00000525592 AIMP1Q12904 312 aaKnown RBP26■■□□□ 1.75
TM9SF1-204ENST00000525592 CCDC93Q567U6 631 aa26■■□□□ 1.75
TM9SF1-204ENST00000525592 TOMM70O94826 608 aa25.99■■□□□ 1.75
TM9SF1-204ENST00000525592 CCDC27Q2M243 656 aa25.99■■□□□ 1.75
TM9SF1-204ENST00000525592 UTP14AQ9BVJ6 771 aaKnown RBP25.98■■□□□ 1.75
TM9SF1-204ENST00000525592 HYPKQ9NX55 129 aa25.98■■□□□ 1.75
TM9SF1-204ENST00000525592 GLTPD2A6NH11 291 aa25.97■■□□□ 1.75
TM9SF1-204ENST00000525592 HOXA10P31260 410 aaPredicted RBP25.97■■□□□ 1.75
TM9SF1-204ENST00000525592 NCBP3Q53F19 620 aaKnown RBP25.97■■□□□ 1.75
TM9SF1-204ENST00000525592 RPGRQ92834 1020 aaKnown RBP25.97■■□□□ 1.75
TM9SF1-204ENST00000525592 TCIRG1Q13488 830 aa25.96■■□□□ 1.75
TM9SF1-204ENST00000525592 PLBD2Q8NHP8 589 aa25.96■■□□□ 1.75
TM9SF1-204ENST00000525592 CHMP4AQ9BY43 222 aa25.96■■□□□ 1.75
TM9SF1-204ENST00000525592 SLC10A5Q5PT55 438 aa25.95■■□□□ 1.74
TM9SF1-204ENST00000525592 NLRP10Q86W26 655 aa25.95■■□□□ 1.74
TM9SF1-204ENST00000525592 C16orf71Q8IYS4 520 aaPredicted RBP25.95■■□□□ 1.74
TM9SF1-204ENST00000525592 RTKN2Q8IZC4 609 aa25.95■■□□□ 1.74
TM9SF1-204ENST00000525592 CEP350Q5VT06 3117 aa25.94■■□□□ 1.74
TM9SF1-204ENST00000525592 HSPA6P17066 643 aa25.94■■□□□ 1.74
TM9SF1-204ENST00000525592 ANKRD13DQ6ZTN6 518 aa25.94■■□□□ 1.74
TM9SF1-204ENST00000525592 NLRP3Q96P20 1036 aa25.94■■□□□ 1.74
TM9SF1-204ENST00000525592 FKBP4Q02790 459 aaKnown RBP eCLIP25.93■■□□□ 1.74
TM9SF1-204ENST00000525592 CC2D2BQ6DHV5 1058 aa25.93■■□□□ 1.74
TM9SF1-204ENST00000525592 RBM46Q8TBY0 533 aaKnown RBP25.93■■□□□ 1.74
TM9SF1-204ENST00000525592 CRAMP1Q96RY5 1269 aa25.93■■□□□ 1.74
TM9SF1-204ENST00000525592 DPY19L2Q6NUT2 758 aa25.92■■□□□ 1.74
TM9SF1-204ENST00000525592 WWC1Q8IX03 1113 aa25.92■■□□□ 1.74
TM9SF1-204ENST00000525592 RBM17Q96I25 401 aaKnown RBP25.92■■□□□ 1.74
TM9SF1-204ENST00000525592 RRAGCQ9HB90 399 aa25.92■■□□□ 1.74
TM9SF1-204ENST00000525592 IL16Q14005 1332 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 SH3TC1Q8TE82 1336 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 SNED1Q8TER0 1413 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 GRIPAP1Q4V328 841 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 C8orf58Q8NAV2 365 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 WDR90Q96KV7 1748 aa25.9■■□□□ 1.74
TM9SF1-204ENST00000525592 VEGFAP15692 232 aaPredicted RBP25.89■■□□□ 1.74
TM9SF1-204ENST00000525592 C3orf67Q6ZVT6 689 aa25.89■■□□□ 1.74
TM9SF1-204ENST00000525592 TRMT112Q9UI30 125 aaKnown RBP25.89■■□□□ 1.74
TM9SF1-204ENST00000525592 LAMB2P55268 1798 aa25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 ELL2O00472 640 aaPredicted RBP25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 OLFM4Q6UX06 510 aa25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 PSMD1Q99460 953 aa25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 ISCA1Q9BUE6 129 aa25.88■■□□□ 1.73
TM9SF1-204ENST00000525592 FSTL1Q12841 308 aa25.87■■□□□ 1.73
TM9SF1-204ENST00000525592 CCDC30Q5VVM6 783 aa25.87■■□□□ 1.73
TM9SF1-204ENST00000525592 PPEF1O14829 653 aaPredicted RBP25.86■■□□□ 1.73
TM9SF1-204ENST00000525592 TRIM28Q13263 835 aaKnown RBP25.85■■□□□ 1.73
TM9SF1-204ENST00000525592 TSR2Q969E8 191 aaKnown RBP25.85■■□□□ 1.73
TM9SF1-204ENST00000525592 ZNF277Q9NRM2 450 aaPredicted RBP25.85■■□□□ 1.73
TM9SF1-204ENST00000525592 HCLS1P14317 486 aaPredicted RBP25.84■■□□□ 1.73
TM9SF1-204ENST00000525592 SYNE4Q8N205 404 aa25.84■■□□□ 1.73
TM9SF1-204ENST00000525592 DDX60Q8IY21 1712 aaKnown RBP25.83■■□□□ 1.73
TM9SF1-204ENST00000525592 IARSP41252 1262 aaKnown RBP25.83■■□□□ 1.73
TM9SF1-204ENST00000525592 RIC3Q7Z5B4 369 aa25.83■■□□□ 1.73
TM9SF1-204ENST00000525592 PHAXQ9H814 394 aaKnown RBP25.83■■□□□ 1.73
TM9SF1-204ENST00000525592 ABCC4O15439 1325 aa25.83■■□□□ 1.73
TM9SF1-204ENST00000525592 APLP1P51693 650 aa25.82■■□□□ 1.72
TM9SF1-204ENST00000525592 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
TM9SF1-204ENST00000525592 SMC1BQ8NDV3 1235 aa25.82■■□□□ 1.72
TM9SF1-204ENST00000525592 TMX4Q9H1E5 349 aaPredicted RBP25.82■■□□□ 1.72
TM9SF1-204ENST00000525592 ATP5J2-PTCD1G3V325 749 aa25.81■■□□□ 1.72
TM9SF1-204ENST00000525592 DDX58O95786 925 aaKnown RBP25.81■■□□□ 1.72
TM9SF1-204ENST00000525592 WDR63Q8IWG1 891 aa25.81■■□□□ 1.72
TM9SF1-204ENST00000525592 ATP6V0A2Q9Y487 856 aa25.81■■□□□ 1.72
TM9SF1-204ENST00000525592 POTECB2RU33 542 aa25.8■■□□□ 1.72
TM9SF1-204ENST00000525592 BBOX1O75936 387 aa25.8■■□□□ 1.72
TM9SF1-204ENST00000525592 DDX46Q7L014 1031 aaKnown RBP25.8■■□□□ 1.72
TM9SF1-204ENST00000525592 TWISTNBQ3B726 338 aaPredicted RBP25.79■■□□□ 1.72
TM9SF1-204ENST00000525592 FAM89AQ96GI7 184 aa25.79■■□□□ 1.72
TM9SF1-204ENST00000525592 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
TM9SF1-204ENST00000525592 DDNO94850 711 aaPredicted RBP25.78■■□□□ 1.72
TM9SF1-204ENST00000525592 JDP2Q8WYK2 163 aa25.78■■□□□ 1.72
TM9SF1-204ENST00000525592 L3MBTL3Q96JM7 780 aaPredicted RBP25.78■■□□□ 1.72
TM9SF1-204ENST00000525592 SCN4AP35499 1836 aa25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 FZD9O00144 591 aa25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 HSP90B1P14625 803 aaKnown RBP25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 GRAPQ13588 217 aa25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 TMC4Q7Z404 712 aa25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 GRAPLQ8TC17 118 aaPredicted RBP25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 FANCIQ9NVI1 1328 aa25.77■■□□□ 1.72
TM9SF1-204ENST00000525592 IQCA1LA6NCM1 817 aa25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 SF3B3Q15393 1217 aaKnown RBP25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 SP8Q8IXZ3 490 aa25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 FAM9BQ8IZU0 186 aa25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 ZBTB38Q8NAP3 1195 aaPredicted RBP25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 CCDC191Q8NCU4 936 aa25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 ZNF541Q9H0D2 1346 aa25.76■■□□□ 1.71
TM9SF1-204ENST00000525592 MYD88Q99836 296 aa25.75■■□□□ 1.71
TM9SF1-204ENST00000525592 METTL22Q9BUU2 404 aaPredicted RBP25.75■■□□□ 1.71
TM9SF1-204ENST00000525592 VPS33BQ9H267 617 aa25.75■■□□□ 1.71
TM9SF1-204ENST00000525592 IRS4O14654 1257 aaPredicted RBP25.74■■□□□ 1.71
TM9SF1-204ENST00000525592 SUPT20HQ8NEM7 779 aa25.74■■□□□ 1.71
TM9SF1-204ENST00000525592 ZNF428Q96B54 188 aa25.74■■□□□ 1.71
TM9SF1-204ENST00000525592 LRRC37AA6NMS7 1700 aa25.74■■□□□ 1.71
TM9SF1-204ENST00000525592 KSR2Q6VAB6 950 aa25.73■■□□□ 1.71
TM9SF1-204ENST00000525592 SLC51AQ86UW1 340 aa25.73■■□□□ 1.71
TM9SF1-204ENST00000525592 LARGE2Q8N3Y3 721 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms