RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
PACS1-202ENST00000524784 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
PACS1-202ENST00000524784 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
PACS1-202ENST00000524784 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
PACS1-202ENST00000524784 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
PACS1-202ENST00000524784 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
PACS1-202ENST00000524784 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
PACS1-202ENST00000524784 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
PACS1-202ENST00000524784 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
PACS1-202ENST00000524784 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
PACS1-202ENST00000524784 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
PACS1-202ENST00000524784 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
PACS1-202ENST00000524784 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
PACS1-202ENST00000524784 MSH5O43196 834 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 CASP7P55210 303 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 MTX1Q13505 466 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PACS1-202ENST00000524784 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
PACS1-202ENST00000524784 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
PACS1-202ENST00000524784 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
PACS1-202ENST00000524784 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
PACS1-202ENST00000524784 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
PACS1-202ENST00000524784 UBN2Q6ZU65 1347 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
PACS1-202ENST00000524784 POLA2Q14181 598 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
PACS1-202ENST00000524784 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
PACS1-202ENST00000524784 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
PACS1-202ENST00000524784 NUP98P52948 1817 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 NPHP1O15259 732 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
PACS1-202ENST00000524784 FOXO4P98177 505 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
PACS1-202ENST00000524784 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 TPTE2Q6XPS3 522 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
PACS1-202ENST00000524784 PDZRN3Q9UPQ7 1066 aa13.14□□□□□ -0.31
PACS1-202ENST00000524784 PDE8AO60658 829 aa13.13□□□□□ -0.31
PACS1-202ENST00000524784 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
PACS1-202ENST00000524784 NUCB1Q02818 461 aa13.13□□□□□ -0.31
PACS1-202ENST00000524784 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
PACS1-202ENST00000524784 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
PACS1-202ENST00000524784 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
PACS1-202ENST00000524784 NTSR2O95665 410 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 GYS1P13807 737 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.31
PACS1-202ENST00000524784 NFIXQ14938 502 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
PACS1-202ENST00000524784 APBB1O00213 710 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 CTSWP56202 376 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
PACS1-202ENST00000524784 NUTM1Q86Y26 1132 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
PACS1-202ENST00000524784 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
PACS1-202ENST00000524784 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 CARMIL3Q8ND23 1372 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 CSF1RP07333 972 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
PACS1-202ENST00000524784 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 TTLL11Q8NHH1 800 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 LRRCC1Q9C099 1032 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 COPRSQ9NQ92 184 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 PNPLA7Q6ZV29 1317 aa13.1□□□□□ -0.31
PACS1-202ENST00000524784 ANKRD18BA2A2Z9 1011 aa13.09□□□□□ -0.31
PACS1-202ENST00000524784 TM4SF1P30408 202 aa13.09□□□□□ -0.31
PACS1-202ENST00000524784 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
PACS1-202ENST00000524784 RGS3P49796 1198 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms