RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 PRPF40BQ6NWY9 871 aaKnown RBP10.7□□□□□ -0.7
PKP3-202ENST00000524646 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
PKP3-202ENST00000524646 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 PDRG1Q9NUG6 133 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 CNPY2Q9Y2B0 182 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 CYP46A1Q9Y6A2 500 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 NPHP3Q7Z494 1330 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
PKP3-202ENST00000524646 SYT1P21579 422 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
PKP3-202ENST00000524646 NMIQ13287 307 aaPredicted RBP10.69□□□□□ -0.7
PKP3-202ENST00000524646 UVSSAQ2YD98 709 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 CCDC83Q8IWF9 413 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 RNF214Q8ND24 703 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 KAZALD1Q96I82 304 aa10.69□□□□□ -0.7
PKP3-202ENST00000524646 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.69□□□□□ -0.7
PKP3-202ENST00000524646 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
PKP3-202ENST00000524646 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
PKP3-202ENST00000524646 TNS3Q68CZ2 1445 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 PRAMEF22A3QJZ6 481 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 SASH1O94885 1247 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 CPA1P15085 419 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 ZKSCAN1P17029 563 aaPredicted RBP10.68□□□□□ -0.7
PKP3-202ENST00000524646 GJB2P29033 226 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 ST3GAL1Q11201 340 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 PDIA6Q15084 440 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 CREB3L3Q68CJ9 461 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
PKP3-202ENST00000524646 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
PKP3-202ENST00000524646 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 MTMR6Q9Y217 621 aa10.68□□□□□ -0.7
PKP3-202ENST00000524646 ANKRD36CQ5JPF3 1778 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 FIBPO43427 364 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 RRP9O43818 475 aaKnown RBP10.67□□□□□ -0.7
PKP3-202ENST00000524646 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 PDIA4P13667 645 aaKnown RBP10.67□□□□□ -0.7
PKP3-202ENST00000524646 PSMA5P28066 241 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
PKP3-202ENST00000524646 NEXNQ0ZGT2 675 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 NECTIN1Q15223 517 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 EAF2Q96CJ1 260 aaPredicted RBP10.67□□□□□ -0.7
PKP3-202ENST00000524646 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 SLC52A2Q9HAB3 445 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 HMG20BQ9P0W2 317 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
PKP3-202ENST00000524646 ECM29Q5VYK3 1845 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 A0A0D9SFI3 127 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 SLC27A2O14975 620 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 KCNJ4P48050 445 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 ADCK5Q3MIX3 580 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 RNF20Q5VTR2 975 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 KRT28Q7Z3Y7 464 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 MAP4K1Q92918 833 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 METTL22Q9BUU2 404 aaPredicted RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 ALDH8A1Q9H2A2 487 aaPredicted RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 TLR7Q9NYK1 1049 aaKnown RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
PKP3-202ENST00000524646 MYH3P11055 1940 aa10.66□□□□□ -0.7
PKP3-202ENST00000524646 KCPQ6ZWJ8 1503 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.7
PKP3-202ENST00000524646 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
PKP3-202ENST00000524646 PHKG2P15735 406 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
PKP3-202ENST00000524646 GCKRQ14397 625 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.7
PKP3-202ENST00000524646 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 ZNF609O15014 1411 aa10.65□□□□□ -0.7
PKP3-202ENST00000524646 ELP1O95163 1332 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 VPS37CA5D8V6 355 aaPredicted RBP10.64□□□□□ -0.71
PKP3-202ENST00000524646 PDCP20941 246 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
PKP3-202ENST00000524646 ME3Q16798 604 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 MYD88Q99836 296 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
PKP3-202ENST00000524646 FUCA2Q9BTY2 467 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 CCDC8Q9H0W5 538 aaPredicted RBP10.64□□□□□ -0.71
PKP3-202ENST00000524646 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
PKP3-202ENST00000524646 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 PALLDQ8WX93 1383 aa10.64□□□□□ -0.71
PKP3-202ENST00000524646 CHD4Q14839 1912 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 RFX5P48382 616 aaPredicted RBP10.63□□□□□ -0.71
PKP3-202ENST00000524646 KRT85P78386 507 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 DNM1Q05193 864 aaKnown RBP10.63□□□□□ -0.71
PKP3-202ENST00000524646 KRT32Q14532 448 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms