RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 CHMP4AQ9BY43 222 aa24.43■■□□□ 1.5
CTSB-206ENST00000524500 RNF123Q5XPI4 1314 aa24.42■■□□□ 1.5
CTSB-206ENST00000524500 CCDC27Q2M243 656 aa24.42■■□□□ 1.5
CTSB-206ENST00000524500 PLBD2Q8NHP8 589 aa24.42■■□□□ 1.5
CTSB-206ENST00000524500 ARFGEF2Q9Y6D5 1785 aa24.42■■□□□ 1.5
CTSB-206ENST00000524500 GLTPD2A6NH11 291 aa24.41■■□□□ 1.5
CTSB-206ENST00000524500 ANKRD13DQ6ZTN6 518 aa24.41■■□□□ 1.5
CTSB-206ENST00000524500 RTKN2Q8IZC4 609 aa24.41■■□□□ 1.5
CTSB-206ENST00000524500 NLRP3Q96P20 1036 aa24.41■■□□□ 1.5
CTSB-206ENST00000524500 ELL2O00472 640 aaPredicted RBP24.4■■□□□ 1.5
CTSB-206ENST00000524500 DPY19L2Q6NUT2 758 aa24.4■■□□□ 1.5
CTSB-206ENST00000524500 NLRP10Q86W26 655 aa24.4■■□□□ 1.5
CTSB-206ENST00000524500 RBM17Q96I25 401 aaKnown RBP24.4■■□□□ 1.5
CTSB-206ENST00000524500 RRAGCQ9HB90 399 aa24.4■■□□□ 1.5
CTSB-206ENST00000524500 CACNA1SQ13698 1873 aa24.4■■□□□ 1.5
CTSB-206ENST00000524500 FER1L6Q2WGJ9 1857 aa24.39■■□□□ 1.5
CTSB-206ENST00000524500 HOXA10P31260 410 aaPredicted RBP24.39■■□□□ 1.49
CTSB-206ENST00000524500 NCBP3Q53F19 620 aaKnown RBP24.39■■□□□ 1.49
CTSB-206ENST00000524500 SLC10A5Q5PT55 438 aa24.39■■□□□ 1.49
CTSB-206ENST00000524500 TNRC6CQ9HCJ0 1690 aaKnown RBP24.38■■□□□ 1.49
CTSB-206ENST00000524500 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.49
CTSB-206ENST00000524500 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
CTSB-206ENST00000524500 TRMT112Q9UI30 125 aaKnown RBP24.38■■□□□ 1.49
CTSB-206ENST00000524500 HSPA6P17066 643 aa24.37■■□□□ 1.49
CTSB-206ENST00000524500 CC2D2BQ6DHV5 1058 aa24.37■■□□□ 1.49
CTSB-206ENST00000524500 C8orf58Q8NAV2 365 aa24.37■■□□□ 1.49
CTSB-206ENST00000524500 CRAMP1Q96RY5 1269 aa24.37■■□□□ 1.49
CTSB-206ENST00000524500 CCDC30Q5VVM6 783 aa24.36■■□□□ 1.49
CTSB-206ENST00000524500 RBM46Q8TBY0 533 aaKnown RBP24.36■■□□□ 1.49
CTSB-206ENST00000524500 SH3TC1Q8TE82 1336 aa24.35■■□□□ 1.49
CTSB-206ENST00000524500 VEGFAP15692 232 aaPredicted RBP24.35■■□□□ 1.49
CTSB-206ENST00000524500 GOLGA2Q08379 1002 aa24.35■■□□□ 1.49
CTSB-206ENST00000524500 OLFM4Q6UX06 510 aa24.35■■□□□ 1.49
CTSB-206ENST00000524500 TIAM2Q8IVF5 1701 aa24.35■■□□□ 1.49
CTSB-206ENST00000524500 CCDC88AQ3V6T2 1871 aa24.34■■□□□ 1.49
CTSB-206ENST00000524500 GRIPAP1Q4V328 841 aa24.34■■□□□ 1.49
CTSB-206ENST00000524500 RIC3Q7Z5B4 369 aa24.34■■□□□ 1.49
CTSB-206ENST00000524500 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
CTSB-206ENST00000524500 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
CTSB-206ENST00000524500 IL16Q14005 1332 aa24.34■■□□□ 1.49
CTSB-206ENST00000524500 C3orf67Q6ZVT6 689 aa24.33■■□□□ 1.49
CTSB-206ENST00000524500 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.49
CTSB-206ENST00000524500 ZNF277Q9NRM2 450 aaPredicted RBP24.33■■□□□ 1.49
CTSB-206ENST00000524500 PPEF1O14829 653 aaPredicted RBP24.32■■□□□ 1.48
CTSB-206ENST00000524500 HCLS1P14317 486 aaPredicted RBP24.32■■□□□ 1.48
CTSB-206ENST00000524500 ISCA1Q9BUE6 129 aa24.32■■□□□ 1.48
CTSB-206ENST00000524500 ATP5J2-PTCD1G3V325 749 aa24.31■■□□□ 1.48
CTSB-206ENST00000524500 SYNE4Q8N205 404 aa24.31■■□□□ 1.48
CTSB-206ENST00000524500 PSMD1Q99460 953 aa24.31■■□□□ 1.48
CTSB-206ENST00000524500 PHAXQ9H814 394 aaKnown RBP24.31■■□□□ 1.48
CTSB-206ENST00000524500 DICER1Q9UPY3 1922 aaKnown RBP24.3■■□□□ 1.48
CTSB-206ENST00000524500 DDX58O95786 925 aaKnown RBP24.3■■□□□ 1.48
CTSB-206ENST00000524500 FSTL1Q12841 308 aa24.3■■□□□ 1.48
CTSB-206ENST00000524500 TSPYL6Q8N831 410 aa24.3■■□□□ 1.48
CTSB-206ENST00000524500 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
CTSB-206ENST00000524500 IARSP41252 1262 aaKnown RBP24.29■■□□□ 1.48
CTSB-206ENST00000524500 TRIM28Q13263 835 aaKnown RBP24.29■■□□□ 1.48
CTSB-206ENST00000524500 DDX46Q7L014 1031 aaKnown RBP24.29■■□□□ 1.48
CTSB-206ENST00000524500 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
CTSB-206ENST00000524500 STK31Q9BXU1 1019 aa24.29■■□□□ 1.48
CTSB-206ENST00000524500 TCERG1O14776 1098 aaKnown RBP24.28■■□□□ 1.48
CTSB-206ENST00000524500 WDR63Q8IWG1 891 aa24.28■■□□□ 1.48
CTSB-206ENST00000524500 BBOX1O75936 387 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 APLP1P51693 650 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
CTSB-206ENST00000524500 SMC1BQ8NDV3 1235 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 JDP2Q8WYK2 163 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 ZNF428Q96B54 188 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 FAM89AQ96GI7 184 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 ABCC4O15439 1325 aa24.27■■□□□ 1.48
CTSB-206ENST00000524500 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
CTSB-206ENST00000524500 ATP6V0A2Q9Y487 856 aa24.26■■□□□ 1.47
CTSB-206ENST00000524500 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
CTSB-206ENST00000524500 MYD88Q99836 296 aa24.25■■□□□ 1.47
CTSB-206ENST00000524500 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
CTSB-206ENST00000524500 SNED1Q8TER0 1413 aa24.25■■□□□ 1.47
CTSB-206ENST00000524500 WDR90Q96KV7 1748 aa24.24■■□□□ 1.47
CTSB-206ENST00000524500 GRAPQ13588 217 aa24.24■■□□□ 1.47
CTSB-206ENST00000524500 GRAPLQ8TC17 118 aaPredicted RBP24.24■■□□□ 1.47
CTSB-206ENST00000524500 IQCA1LA6NCM1 817 aa24.23■■□□□ 1.47
CTSB-206ENST00000524500 POTECB2RU33 542 aa24.23■■□□□ 1.47
CTSB-206ENST00000524500 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
CTSB-206ENST00000524500 CCDC191Q8NCU4 936 aa24.23■■□□□ 1.47
CTSB-206ENST00000524500 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
CTSB-206ENST00000524500 IRS4O14654 1257 aaPredicted RBP24.22■■□□□ 1.47
CTSB-206ENST00000524500 RTL5Q5HYW3 569 aaPredicted RBP24.22■■□□□ 1.47
CTSB-206ENST00000524500 TMC4Q7Z404 712 aa24.22■■□□□ 1.47
CTSB-206ENST00000524500 SP8Q8IXZ3 490 aa24.22■■□□□ 1.47
CTSB-206ENST00000524500 METTL22Q9BUU2 404 aaPredicted RBP24.22■■□□□ 1.47
CTSB-206ENST00000524500 FZD9O00144 591 aa24.21■■□□□ 1.47
CTSB-206ENST00000524500 SF3B3Q15393 1217 aaKnown RBP24.21■■□□□ 1.47
CTSB-206ENST00000524500 LARGE2Q8N3Y3 721 aa24.21■■□□□ 1.47
CTSB-206ENST00000524500 SUPT20HQ8NEM7 779 aa24.21■■□□□ 1.47
CTSB-206ENST00000524500 CWC25Q9NXE8 425 aaPredicted RBP24.21■■□□□ 1.47
CTSB-206ENST00000524500 ZNF541Q9H0D2 1346 aa24.2■■□□□ 1.46
CTSB-206ENST00000524500 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
CTSB-206ENST00000524500 EIF6P56537 245 aaKnown RBP24.2■■□□□ 1.46
CTSB-206ENST00000524500 KSR2Q6VAB6 950 aa24.2■■□□□ 1.46
CTSB-206ENST00000524500 L3MBTL3Q96JM7 780 aaPredicted RBP24.2■■□□□ 1.46
CTSB-206ENST00000524500 VPS33BQ9H267 617 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms