RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
HDAC2-217ENST00000524334 EXOSC9Q06265 439 aaKnown RBP16.47■□□□□ 0.23
HDAC2-217ENST00000524334 C9orf131Q5VYM1 1079 aa16.47■□□□□ 0.23
HDAC2-217ENST00000524334 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
HDAC2-217ENST00000524334 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
HDAC2-217ENST00000524334 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.23
HDAC2-217ENST00000524334 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
HDAC2-217ENST00000524334 VAMP4O75379 141 aa16.46■□□□□ 0.23
HDAC2-217ENST00000524334 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
HDAC2-217ENST00000524334 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
HDAC2-217ENST00000524334 LMNB1P20700 586 aa16.45■□□□□ 0.22
HDAC2-217ENST00000524334 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
HDAC2-217ENST00000524334 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
HDAC2-217ENST00000524334 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
HDAC2-217ENST00000524334 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
HDAC2-217ENST00000524334 ADCY9O60503 1353 aa16.44■□□□□ 0.22
HDAC2-217ENST00000524334 E9PSI1 815 aa16.44■□□□□ 0.22
HDAC2-217ENST00000524334 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
HDAC2-217ENST00000524334 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
HDAC2-217ENST00000524334 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
HDAC2-217ENST00000524334 METTL22Q9BUU2 404 aaPredicted RBP16.44■□□□□ 0.22
HDAC2-217ENST00000524334 RNF181Q9P0P0 153 aa16.44■□□□□ 0.22
HDAC2-217ENST00000524334 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
HDAC2-217ENST00000524334 GRIPAP1Q4V328 841 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 MIER1Q8N108 512 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 CCDC191Q8NCU4 936 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 MYD88Q99836 296 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
HDAC2-217ENST00000524334 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
HDAC2-217ENST00000524334 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
HDAC2-217ENST00000524334 NFKBIEO00221 500 aa16.42■□□□□ 0.22
HDAC2-217ENST00000524334 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
HDAC2-217ENST00000524334 NEXNQ0ZGT2 675 aa16.42■□□□□ 0.22
HDAC2-217ENST00000524334 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
HDAC2-217ENST00000524334 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
HDAC2-217ENST00000524334 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
HDAC2-217ENST00000524334 RASSF7Q02833 373 aa16.41■□□□□ 0.22
HDAC2-217ENST00000524334 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
HDAC2-217ENST00000524334 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
HDAC2-217ENST00000524334 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
HDAC2-217ENST00000524334 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
HDAC2-217ENST00000524334 CWC25Q9NXE8 425 aaPredicted RBP16.41■□□□□ 0.22
HDAC2-217ENST00000524334 BBOX1O75936 387 aa16.4■□□□□ 0.22
HDAC2-217ENST00000524334 FLIIQ13045 1269 aa16.4■□□□□ 0.22
HDAC2-217ENST00000524334 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
HDAC2-217ENST00000524334 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
HDAC2-217ENST00000524334 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
HDAC2-217ENST00000524334 FKBP5Q13451 457 aaPredicted RBP16.39■□□□□ 0.21
HDAC2-217ENST00000524334 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
HDAC2-217ENST00000524334 G2E3Q7L622 706 aa16.39■□□□□ 0.21
HDAC2-217ENST00000524334 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.21
HDAC2-217ENST00000524334 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
HDAC2-217ENST00000524334 CHD4Q14839 1912 aa16.39■□□□□ 0.21
HDAC2-217ENST00000524334 NUP98P52948 1817 aa16.38■□□□□ 0.21
HDAC2-217ENST00000524334 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
HDAC2-217ENST00000524334 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
HDAC2-217ENST00000524334 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDAC2-217ENST00000524334 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
HDAC2-217ENST00000524334 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
HDAC2-217ENST00000524334 DLEC1Q9Y238 1755 aa16.37■□□□□ 0.21
HDAC2-217ENST00000524334 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
HDAC2-217ENST00000524334 PRELPP51888 382 aa16.37■□□□□ 0.21
HDAC2-217ENST00000524334 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
HDAC2-217ENST00000524334 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
HDAC2-217ENST00000524334 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
HDAC2-217ENST00000524334 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
HDAC2-217ENST00000524334 DPY19L2Q6NUT2 758 aa16.36■□□□□ 0.21
HDAC2-217ENST00000524334 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
HDAC2-217ENST00000524334 PSMD1Q99460 953 aa16.36■□□□□ 0.21
HDAC2-217ENST00000524334 ATP6V0A2Q9Y487 856 aa16.36■□□□□ 0.21
HDAC2-217ENST00000524334 GRAPQ13588 217 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
HDAC2-217ENST00000524334 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
HDAC2-217ENST00000524334 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 ABCC4O15439 1325 aa16.35■□□□□ 0.21
HDAC2-217ENST00000524334 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
HDAC2-217ENST00000524334 GLTPD2A6NH11 291 aa16.34■□□□□ 0.21
HDAC2-217ENST00000524334 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
HDAC2-217ENST00000524334 PDE8AO60658 829 aa16.34■□□□□ 0.21
HDAC2-217ENST00000524334 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
HDAC2-217ENST00000524334 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
HDAC2-217ENST00000524334 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
HDAC2-217ENST00000524334 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
HDAC2-217ENST00000524334 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
HDAC2-217ENST00000524334 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
HDAC2-217ENST00000524334 H7C1W4 665 aa16.32■□□□□ 0.2
HDAC2-217ENST00000524334 GCKRQ14397 625 aa16.32■□□□□ 0.2
HDAC2-217ENST00000524334 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
HDAC2-217ENST00000524334 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
HDAC2-217ENST00000524334 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
HDAC2-217ENST00000524334 TNRC6CQ9HCJ0 1690 aaKnown RBP16.31■□□□□ 0.2
HDAC2-217ENST00000524334 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
HDAC2-217ENST00000524334 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms