RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
VPS13B-212ENST00000524330 ATRNO75882 1429 aa12.2□□□□□ -0.46
VPS13B-212ENST00000524330 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 SDSP20132 328 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 MCCP23508 829 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 CRKLP46109 303 aaKnown RBP12.19□□□□□ -0.46
VPS13B-212ENST00000524330 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
VPS13B-212ENST00000524330 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 ECHDC1Q9NTX5 307 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 ZBTB1Q9Y2K1 713 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 TJP1Q07157 1748 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
VPS13B-212ENST00000524330 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
VPS13B-212ENST00000524330 HIP1O00291 1037 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
VPS13B-212ENST00000524330 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
VPS13B-212ENST00000524330 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
VPS13B-212ENST00000524330 CASP7P55210 303 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 TAF7LQ5H9L4 462 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 AACSQ86V21 672 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
VPS13B-212ENST00000524330 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 CIAO1O76071 339 aa12.17□□□□□ -0.46
VPS13B-212ENST00000524330 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
VPS13B-212ENST00000524330 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
VPS13B-212ENST00000524330 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
VPS13B-212ENST00000524330 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
VPS13B-212ENST00000524330 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 SEC24BO95487 1268 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 CLEC4GQ6UXB4 293 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 GPR108Q9NPR9 543 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 TRMT112Q9UI30 125 aaKnown RBP12.16□□□□□ -0.46
VPS13B-212ENST00000524330 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
VPS13B-212ENST00000524330 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
VPS13B-212ENST00000524330 ANKRD36CQ5JPF3 1778 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 PDE8AO60658 829 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 FOXO4P98177 505 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
VPS13B-212ENST00000524330 IFIT5Q13325 482 aaKnown RBP12.15□□□□□ -0.46
VPS13B-212ENST00000524330 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
VPS13B-212ENST00000524330 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 SIL1Q9H173 461 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 RREB1Q92766 1687 aa12.15□□□□□ -0.46
VPS13B-212ENST00000524330 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 EYA2O00167 538 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 KCNQ2O43526 872 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
VPS13B-212ENST00000524330 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 EVI5LQ96CN4 794 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
VPS13B-212ENST00000524330 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
VPS13B-212ENST00000524330 SH3TC1Q8TE82 1336 aa12.13□□□□□ -0.47
VPS13B-212ENST00000524330 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-212ENST00000524330 SASH1O94885 1247 aa12.13□□□□□ -0.47
VPS13B-212ENST00000524330 GPTP24298 496 aa12.13□□□□□ -0.47
VPS13B-212ENST00000524330 ITPK1Q13572 414 aa12.13□□□□□ -0.47
VPS13B-212ENST00000524330 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
VPS13B-212ENST00000524330 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-212ENST00000524330 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-212ENST00000524330 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
VPS13B-212ENST00000524330 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
VPS13B-212ENST00000524330 NUP98P52948 1817 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 CSF1RP07333 972 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 CTSWP56202 376 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 HLFQ16534 295 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
VPS13B-212ENST00000524330 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
VPS13B-212ENST00000524330 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
VPS13B-212ENST00000524330 ZPR1O75312 459 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 CHMLP26374 656 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
VPS13B-212ENST00000524330 TFCP2Q12800 502 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 RABEP1Q15276 862 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 ESYT1Q9BSJ8 1104 aa12.11□□□□□ -0.47
VPS13B-212ENST00000524330 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms