RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 LRSAM1Q6UWE0 723 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 NUTM1Q86Y26 1132 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 CNKSR2Q8WXI2 1034 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 NECTIN2Q92692 538 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 MAP4K1Q92918 833 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 IL1RAPL2Q9NP60 686 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 ATP6V1DQ9Y5K8 247 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 KCPQ6ZWJ8 1503 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 IGKV5-2P06315 115 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
CLINT1-208ENST00000524306 MCM5P33992 734 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 CSPP1Q1MSJ5 1256 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 USPL1Q5W0Q7 1092 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 GPT2Q8TD30 523 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 UBE2Q2Q8WVN8 375 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 SUCLG2Q96I99 432 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 GZF1Q9H116 711 aaPredicted RBP6.57□□□□□ -1.36
CLINT1-208ENST00000524306 ATG3Q9NT62 314 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 CCDC171Q6TFL3 1326 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 ITGB4P16144 1822 aa6.57□□□□□ -1.36
CLINT1-208ENST00000524306 SASH1O94885 1247 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ATP5JP18859 108 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PSMA5P28066 241 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 NASPP49321 788 aaPredicted RBP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 G3BP1Q13283 466 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ANKRD1Q15327 319 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PROSER3Q2NL68 480 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ANP32BQ92688 251 aaKnown RBP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 FMNL2Q96PY5 1086 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 DIAPH3Q9NSV4 1193 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 DCAF8L1A6NGE4 600 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ERVV-2B6SEH9 535 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 RFX5P48382 616 aaPredicted RBP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 CASP7P55210 303 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PKP1Q13835 747 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 FAM184AQ8NB25 1140 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PLBD2Q8NHP8 589 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PANK2Q9BZ23 570 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 IL25Q9H293 177 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 RRAGDQ9NQL2 400 aaPredicted RBP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 FBXO3Q9UK99 471 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ZNF335Q9H4Z2 1342 aaPredicted RBP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 BCL9O00512 1426 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ANKRD36CQ5JPF3 1778 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 THSD7AQ9UPZ6 1657 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 ESPNB1AK53 854 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 TERF1P54274 439 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLINT1-208ENST00000524306 FOXD4L1Q9NU39 408 aa6.56□□□□□ -1.36
CLINT1-208ENST00000524306 KRT32Q14532 448 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 ANKRD13DQ6ZTN6 518 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 RUFY3Q7L099 469 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 BICC1Q9H694 974 aaKnown RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 TJP1Q07157 1748 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 SLIT2O94813 1529 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 PALLDQ8WX93 1383 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 AFDNP55196 1824 aaKnown RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 ZKSCAN1P17029 563 aaPredicted RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 AK2P54819 239 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 OS9Q13438 667 aaPredicted RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 CDCA7Q9BWT1 371 aaPredicted RBP6.55□□□□□ -1.36
CLINT1-208ENST00000524306 CYP46A1Q9Y6A2 500 aa6.55□□□□□ -1.36
CLINT1-208ENST00000524306 LAMB2P55268 1798 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 PCDH11XQ9BZA7 1347 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 PCDH11YQ9BZA8 1340 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 H7C1W4 665 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 RIC3Q7Z5B4 369 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 AACSQ86V21 672 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 RASEFQ8IZ41 740 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 EAF2Q96CJ1 260 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 ELP1O95163 1332 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 CIAO1O76071 339 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 CAVIN1Q6NZI2 390 aaKnown RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 ZSCAN30Q86W11 494 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 FBXL16Q8N461 479 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 CHMP4CQ96CF2 233 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 TRIM44Q96DX7 344 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 ZNF496Q96IT1 587 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 THRAP3Q9Y2W1 955 aaKnown RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 COL5A3P25940 1745 aaPredicted RBP6.54□□□□□ -1.36
CLINT1-208ENST00000524306 SH3TC1Q8TE82 1336 aa6.54□□□□□ -1.36
CLINT1-208ENST00000524306 CYP27B1O15528 508 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 STX6O43752 255 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 NCLP19338 710 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 PDCP20941 246 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 HSPA2P54652 639 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 UBE2HP62256 183 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 CREB3L3Q68CJ9 461 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 COPS6Q7L5N1 327 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 TTC5Q8N0Z6 440 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms