RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 RNF181Q9P0P0 153 aa11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 USP16Q9Y5T5 823 aa11.23□□□□□ -0.61
CTNNA1-242ENST00000524292 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
CTNNA1-242ENST00000524292 ST5P78524 1137 aa11.22□□□□□ -0.61
CTNNA1-242ENST00000524292 NFE2L2Q16236 605 aa11.22□□□□□ -0.61
CTNNA1-242ENST00000524292 CEP350Q5VT06 3117 aa11.22□□□□□ -0.61
CTNNA1-242ENST00000524292 BRIP1Q9BX63 1249 aa11.22□□□□□ -0.61
CTNNA1-242ENST00000524292 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.61
CTNNA1-242ENST00000524292 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
CTNNA1-242ENST00000524292 KIF3CO14782 793 aa11.21□□□□□ -0.61
CTNNA1-242ENST00000524292 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.61
CTNNA1-242ENST00000524292 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
CTNNA1-242ENST00000524292 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 HSPA6P17066 643 aa11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 PRR5LQ6MZQ0 368 aa11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
CTNNA1-242ENST00000524292 TOMM70O94826 608 aa11.19□□□□□ -0.62
CTNNA1-242ENST00000524292 LMNB1P20700 586 aa11.19□□□□□ -0.62
CTNNA1-242ENST00000524292 RASSF7Q02833 373 aa11.19□□□□□ -0.62
CTNNA1-242ENST00000524292 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
CTNNA1-242ENST00000524292 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 PPP1R37O75864 691 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 BBXQ8WY36 941 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 NMRK2Q9NPI5 230 aa11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 NIP7Q9Y221 180 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTNNA1-242ENST00000524292 ANKRD31Q8N7Z5 1873 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 NBPF10Q6P3W6 841 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 TPTE2Q6XPS3 522 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-242ENST00000524292 KDM3BQ7LBC6 1761 aa11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 WDR43Q15061 677 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 MASTLQ96GX5 879 aa11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 TSPYL4Q9UJ04 414 aa11.16□□□□□ -0.62
CTNNA1-242ENST00000524292 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 SBF1O95248 1867 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 TNRC6CQ9HCJ0 1690 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 NFKBIEO00221 500 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 C21orf2O43822 256 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 SRGNP10124 158 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 APLP1P51693 650 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 RIPK4P57078 832 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 RBM46Q8TBY0 533 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 NYXQ9GZU5 481 aa11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 RRP7AQ9Y3A4 280 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-242ENST00000524292 ERBB4Q15303 1308 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 ERVV-1B6SEH8 477 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 MYL6BP14649 208 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 NPR1P16066 1061 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
CTNNA1-242ENST00000524292 MAP3K15Q6ZN16 1313 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 LTBP3Q9NS15 1303 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 FAM177BA6PVY3 158 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 FSTL1Q12841 308 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 HLFQ16534 295 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
CTNNA1-242ENST00000524292 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
CTNNA1-242ENST00000524292 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-242ENST00000524292 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
CTNNA1-242ENST00000524292 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 KLRG2A4D1S0 409 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 PRELPP51888 382 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-242ENST00000524292 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 SLX4Q8IY92 1834 aa11.1□□□□□ -0.63
CTNNA1-242ENST00000524292 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms