RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 MYD88Q99836 296 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
TNPO1-213ENST00000523768 COPRSQ9NQ92 184 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
TNPO1-213ENST00000523768 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 CYP46A1Q9Y6A2 500 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 CYP27B1O15528 508 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 STX6O43752 255 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 ZKSCAN1P17029 563 aaPredicted RBP13.59□□□□□ -0.23
TNPO1-213ENST00000523768 NMIQ13287 307 aaPredicted RBP13.59□□□□□ -0.23
TNPO1-213ENST00000523768 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 SMC3Q9UQE7 1217 aa13.59□□□□□ -0.23
TNPO1-213ENST00000523768 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.23
TNPO1-213ENST00000523768 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 SYT1P21579 422 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 FMNL2Q96PY5 1086 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
TNPO1-213ENST00000523768 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
TNPO1-213ENST00000523768 CSB-PGBD3P0DP91 1061 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 CPA1P15085 419 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 ZSCAN30Q86W11 494 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 SIL1Q9H173 461 aa13.58□□□□□ -0.24
TNPO1-213ENST00000523768 LARGE1O95461 756 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 RFX5P48382 616 aaPredicted RBP13.57□□□□□ -0.24
TNPO1-213ENST00000523768 RABL6Q3YEC7 729 aaPredicted RBP13.57□□□□□ -0.24
TNPO1-213ENST00000523768 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
TNPO1-213ENST00000523768 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
TNPO1-213ENST00000523768 KLHDC4Q8TBB5 520 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
TNPO1-213ENST00000523768 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 CPDO75976 1380 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 JCADQ9P266 1359 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
TNPO1-213ENST00000523768 PHF14O94880 888 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 F13A1P00488 732 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 PSMA5P28066 241 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 SLC27A2O14975 620 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 PTPN12Q05209 780 aaKnown RBP13.56□□□□□ -0.24
TNPO1-213ENST00000523768 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
TNPO1-213ENST00000523768 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 ATP5JP18859 108 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 CCDC83Q8IWF9 413 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
TNPO1-213ENST00000523768 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 PDIA4P13667 645 aaKnown RBP13.55□□□□□ -0.24
TNPO1-213ENST00000523768 GJB2P29033 226 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 KCNJ4P48050 445 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 CHRNA2Q15822 529 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
TNPO1-213ENST00000523768 RNF20Q5VTR2 975 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
TNPO1-213ENST00000523768 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 GLI3P10071 1580 aa13.55□□□□□ -0.24
TNPO1-213ENST00000523768 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
TNPO1-213ENST00000523768 TCHHQ07283 1943 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 CABP4P57796 275 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 ME3Q16798 604 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 RFX7Q2KHR2 1363 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 ARFGEF2Q9Y6D5 1785 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 CASP7P55210 303 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 UBE2HP62256 183 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
TNPO1-213ENST00000523768 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
TNPO1-213ENST00000523768 HMG20BQ9P0W2 317 aa13.53□□□□□ -0.24
TNPO1-213ENST00000523768 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
TNPO1-213ENST00000523768 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
TNPO1-213ENST00000523768 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
TNPO1-213ENST00000523768 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
TNPO1-213ENST00000523768 A0A087WZG4 1122 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 LETM1O95202 739 aaPredicted RBP13.52□□□□□ -0.24
TNPO1-213ENST00000523768 TFCP2Q12800 502 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.24
TNPO1-213ENST00000523768 NOL7Q9UMY1 257 aaKnown RBP13.52□□□□□ -0.24
TNPO1-213ENST00000523768 TAF5LO75529 589 aa13.52□□□□□ -0.25
TNPO1-213ENST00000523768 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.25
TNPO1-213ENST00000523768 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.25
TNPO1-213ENST00000523768 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
TNPO1-213ENST00000523768 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms