RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	SPAG9	O60271	1321 aa	Known RBP	9.51	□□□□□ -0.89
EIF3E-216	ENST00000522887	ZFYVE16	Q7Z3T8	1539 aa		9.51	□□□□□ -0.89
EIF3E-216	ENST00000522887	CFAP74	Q9C0B2	1584 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	CEP162	Q5TB80	1403 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	SFI1	A8K8P3	1242 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	KRT76	Q01546	638 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	LBR	Q14739	615 aa	Known RBP	9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	ZNF385C	Q66K41	422 aa	Predicted RBP	9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	ZNF295-AS1	Q8N0V1	137 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	CLP1	Q92989	425 aa	Known RBP	9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	ZDHHC3	Q9NYG2	299 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	PTPRM	P28827	1452 aa		9.5	□□□□□ -0.89
EIF3E-216	ENST00000522887	ATP10A	O60312	1499 aa		9.49	□□□□□ -0.89
EIF3E-216	ENST00000522887	GGT6	Q6P531	493 aa		9.49	□□□□□ -0.89
EIF3E-216	ENST00000522887	SLC9A9	Q8IVB4	645 aa		9.49	□□□□□ -0.89
EIF3E-216	ENST00000522887	ARID3A	Q99856	593 aa		9.49	□□□□□ -0.89
EIF3E-216	ENST00000522887	PCF11	O94913	1555 aa	Known RBP	9.49	□□□□□ -0.89
EIF3E-216	ENST00000522887	FYCO1	Q9BQS8	1478 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	SLC35F4	A4IF30	521 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	FOXO3	O43524	673 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	STAU1	O95793	577 aa	Known RBP	9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	WEE1	P30291	646 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	NBPF1	Q3BBV0	1214 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	CDCA8	Q53HL2	280 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	B4GALNT3	Q6L9W6	998 aa		9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	TSEN2	Q8NCE0	465 aa	Known RBP	9.48	□□□□□ -0.89
EIF3E-216	ENST00000522887	ZNF518A	Q6AHZ1	1483 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	MAGI2	Q86UL8	1455 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	FIGNL2	A6NMB9	653 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	PTS	Q03393	145 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	C4orf17	Q53FE4	359 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	TMEM164	Q5U3C3	297 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	PRICKLE2	Q7Z3G6	844 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	TNS4	Q8IZW8	715 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.47	□□□□□ -0.89	9e-9	■■■■■ 111.8
EIF3E-216	ENST00000522887	ZNF644	Q9H582	1327 aa	Predicted RBP	9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	C9orf84	Q5VXU9	1444 aa		9.47	□□□□□ -0.89
EIF3E-216	ENST00000522887	HECW2	Q9P2P5	1572 aa		9.46	□□□□□ -0.89
EIF3E-216	ENST00000522887	MSTN	O14793	375 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	TSPY4	P0CV99	314 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	TSPY10	P0CW01	314 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	MAP3K10	Q02779	954 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	POU4F2	Q12837	409 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	GPR161	Q8N6U8	529 aa	Known RBP	9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	STK32A	Q8WU08	396 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	COL26A1	Q96A83	441 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	HINFP	Q9BQA5	517 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	TIMMDC1	Q9NPL8	285 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	TRAPPC8	Q9Y2L5	1435 aa		9.46	□□□□□ -0.9
EIF3E-216	ENST00000522887	SERTM1	A2A2V5	107 aa		9.45	□□□□□ -0.9
EIF3E-216	ENST00000522887	C1orf53	Q5VUE5	145 aa		9.45	□□□□□ -0.9
EIF3E-216	ENST00000522887	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.45	□□□□□ -0.9
EIF3E-216	ENST00000522887	FRMPD1	Q5SYB0	1578 aa		9.45	□□□□□ -0.9
EIF3E-216	ENST00000522887	SENP3-EIF4A1	A0A087X0R7	540 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887		H7C1W4	665 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	ADAM23	O75077	832 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	F11	P03951	625 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	TAT	P17735	454 aa	Predicted RBP	9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	HIF1A	Q16665	826 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	CABP1	Q9NZU7	370 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	ATAD2	Q6PL18	1390 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	ARHGEF40	Q8TER5	1519 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	MYO5C	Q9NQX4	1742 aa		9.44	□□□□□ -0.9
EIF3E-216	ENST00000522887	PPP1R12B	O60237	982 aa	Predicted RBP	9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	NOS2	P35228	1153 aa		9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	CCDC155	Q8N6L0	562 aa		9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	NANOS1	Q8WY41	292 aa	Known RBP	9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	CRISPLD1	Q9H336	500 aa		9.43	□□□□□ -0.9
EIF3E-216	ENST00000522887	MADD	Q8WXG6	1647 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	GPATCH8	Q9UKJ3	1502 aa	Known RBP	9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	TMEM88B	A6NKF7	163 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	EML1	O00423	815 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	C21orf2	O43822	256 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	PLA2G4A	P47712	749 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	GALNT6	Q8NCL4	622 aa		9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	SCG3	Q8WXD2	468 aa	Known RBP	9.42	□□□□□ -0.9
EIF3E-216	ENST00000522887	CDC14C	A4D256	554 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	KIF3B	O15066	747 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	PTCD1	O75127	700 aa	Known RBP	9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	ARHGEF15	O94989	841 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	SLURP2	P0DP57	97 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	ITGA6	P23229	1130 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	OCLN	Q16625	522 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	TRIM22	Q8IYM9	498 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	L3MBTL2	Q969R5	705 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	ENAM	Q9NRM1	1142 aa		9.41	□□□□□ -0.9
EIF3E-216	ENST00000522887	BCORL1	Q5H9F3	1711 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	RICTOR	Q6R327	1708 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	RIMS1	Q86UR5	1692 aa	Known RBP	9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	RHOQ	P17081	205 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	NLRP8	Q86W28	1048 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	PGBD3	Q8N328	593 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	ZNF232	Q9UNY5	417 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	USP3	Q9Y6I4	520 aa		9.4	□□□□□ -0.9
EIF3E-216	ENST00000522887	ZMYM4	Q5VZL5	1548 aa		9.4	□□□□□ -0.91
EIF3E-216	ENST00000522887	ARHGEF12	Q9NZN5	1544 aa		9.4	□□□□□ -0.91
EIF3E-216	ENST00000522887	PLEKHH2	Q8IVE3	1493 aa		9.4	□□□□□ -0.91
EIF3E-216	ENST00000522887	PHF20L1	A8MW92	1017 aa		9.39	□□□□□ -0.91

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