RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TANGO6	Q9C0B7	1094 aa		11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	QTRT2	Q9H974	415 aa	Known RBP	11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	ATP5J2-PTCD1	G3V325	749 aa		11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	DEF6	Q9H4E7	631 aa		11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	ZFY	P08048	801 aa	Predicted RBP	11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	USP48	Q86UV5	1035 aa		11.96	□□□□□ -0.49
TCF7-223	ENST00000522653	PUS7	Q96PZ0	661 aa	Known RBP	11.96	□□□□□ -0.49
TCF7-223	ENST00000522653		H0YHG0	523 aa		11.96	□□□□□ -0.5
TCF7-223	ENST00000522653	DZIP3	Q86Y13	1208 aa	Known RBP	11.96	□□□□□ -0.5
TCF7-223	ENST00000522653	RNF216	Q9NWF9	866 aa	Predicted RBP	11.96	□□□□□ -0.5
TCF7-223	ENST00000522653	XRCC6	P12956	609 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
TCF7-223	ENST00000522653	NLGN1	Q8N2Q7	840 aa		11.96	□□□□□ -0.5
TCF7-223	ENST00000522653	ANKRD36B	Q8N2N9	1353 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	CHRNA2	Q15822	529 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	DUSP27	Q5VZP5	1158 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC194	A0A1B0GVG4	234 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	MINDY4B	A8MYZ0	360 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	USP8	P40818	1118 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	TMC4	Q7Z404	712 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	TMTC2	Q8N394	836 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC148	Q8NFR7	591 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	DNAJC5	Q9H3Z4	198 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	ERICH4	A6NGS2	130 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	ANAPC15	P60006	121 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	BLOC1S2	Q6QNY1	142 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	SIRT1	Q96EB6	747 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	PRIMPOL	Q96LW4	560 aa		11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	GTPBP4	Q9BZE4	634 aa	Known RBP	11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
TCF7-223	ENST00000522653	PIK3R4	Q99570	1358 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	EXOSC9	Q06265	439 aa	Known RBP	11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	ARHGEF10L	Q9HCE6	1279 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	ABCC5	O15440	1437 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	GNAT2	P19087	354 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	ATP2B1	P20020	1258 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC181	Q5TID7	509 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	ZNF408	Q9H9D4	720 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	PTPRC	P08575	1304 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	EAPP	Q56P03	285 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC174	Q6PII3	467 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	ARHGAP27	Q6ZUM4	889 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	NBPF3	Q9H094	633 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	CKAP2L	Q8IYA6	745 aa		11.94	□□□□□ -0.5
TCF7-223	ENST00000522653	CBFA2T2	O43439	604 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC192	P0DO97	292 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	GLT8D2	Q9H1C3	349 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	HAUS2	Q9NVX0	235 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	SEPT7	Q16181	437 aa	Known RBP	11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	SPC24	Q8NBT2	197 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	STK24	Q9Y6E0	443 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	NKTR	P30414	1462 aa	Known RBP	11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	ZEB2	O60315	1214 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	RANBP6	O60518	1105 aa	Known RBP	11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	GPT	P24298	496 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	ALDH1L2	Q3SY69	923 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	RBM26	Q5T8P6	1007 aa	Known RBP	11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	CC2D2B	Q6DHV5	1058 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	TBC1D2	Q9BYX2	928 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	KCNG1	Q9UIX4	513 aa		11.93	□□□□□ -0.5
TCF7-223	ENST00000522653	NR1I2	O75469	434 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	CALML4	Q96GE6	196 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	TSPY2	A6NKD2	308 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	SULF1	Q8IWU6	871 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	MSANTD4	Q8NCY6	345 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	DISP3	Q9P2K9	1392 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	CNNM2	Q9H8M5	875 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	CCDC172	P0C7W6	258 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	CAST	P20810	708 aa	Known RBP	11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	CAGE1	Q8TC20	777 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	ZBTB3	Q9H5J0	574 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	GGA1	Q9UJY5	639 aa		11.92	□□□□□ -0.5
TCF7-223	ENST00000522653	GBP2	P32456	591 aa	Predicted RBP	11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	NBPF1	Q3BBV0	1214 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	ZNF397	Q8NF99	534 aa	Predicted RBP	11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	KRT23	Q9C075	422 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	CFAP45	Q9UL16	551 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	BCS1L	Q9Y276	419 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	SAMM50	Q9Y512	469 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	ZNF213	O14771	459 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	PLS1	Q14651	629 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	DPP8	Q6V1X1	898 aa	Predicted RBP	11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	SLC12A7	Q9Y666	1083 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	PLEKHH1	Q9ULM0	1364 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	GRIN3B	O60391	1043 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	CCNA1	P78396	465 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	TBC1D22A	Q8WUA7	517 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	ITSN2	Q9NZM3	1697 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	BMP15	O95972	392 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	IQCE	Q6IPM2	695 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	ARMC9	Q7Z3E5	817 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	RTEL1	Q9NZ71	1219 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	NOS1	P29475	1434 aa		11.91	□□□□□ -0.5
TCF7-223	ENST00000522653	CTTNBP2	Q8WZ74	1663 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	SCAF11	Q99590	1463 aa	Known RBP	11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	WDR33	Q9C0J8	1336 aa	Known RBP	11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	IRX3	P78415	501 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms