RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 KCNA4P22459 653 aa10.84□□□□□ -0.67
PDGFRB-210ENST00000522466 SCNN1DP51172 638 aa10.84□□□□□ -0.67
PDGFRB-210ENST00000522466 SOX10P56693 466 aa10.84□□□□□ -0.67
PDGFRB-210ENST00000522466 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
PDGFRB-210ENST00000522466 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
PDGFRB-210ENST00000522466 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 HSPA5P11021 654 aaKnown RBP10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 GTF2E1P29083 439 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 ALDH1B1P30837 517 aa10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 CIAPIN1Q6FI81 312 aa10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-210ENST00000522466 KLRG2A4D1S0 409 aaPredicted RBP10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 BTBD11A6QL63 1104 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 GNAT3A8MTJ3 354 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 DIAPH1O60610 1272 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 MAP2K2P36507 400 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 HLFQ16534 295 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 ZIC5Q96T25 663 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 GLIS2Q9BZE0 524 aaPredicted RBP10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 ZNF652Q9Y2D9 606 aa10.82□□□□□ -0.68
PDGFRB-210ENST00000522466 CLEC4GQ6UXB4 293 aa10.81□□□□□ -0.68
PDGFRB-210ENST00000522466 USP50Q70EL3 339 aaPredicted RBP10.81□□□□□ -0.68
PDGFRB-210ENST00000522466 NGEFQ8N5V2 710 aa10.81□□□□□ -0.68
PDGFRB-210ENST00000522466 ABCC12Q96J65 1359 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 DLK2Q6UY11 383 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 SAPCD2Q86UD0 394 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 NIM1KQ8IY84 436 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 PSMD1Q99460 953 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 SNED1Q8TER0 1413 aa10.8□□□□□ -0.68
PDGFRB-210ENST00000522466 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 AOC3Q16853 763 aa10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 CC2D1BQ5T0F9 858 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 RPGRQ92834 1020 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 ADARB2Q9NS39 739 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-210ENST00000522466 PPIP5K2O43314 1243 aa10.78□□□□□ -0.68
PDGFRB-210ENST00000522466 CA12O43570 354 aa10.78□□□□□ -0.68
PDGFRB-210ENST00000522466 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
PDGFRB-210ENST00000522466 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDGFRB-210ENST00000522466 POLR2AP24928 1970 aaKnown RBP10.77□□□□□ -0.68
PDGFRB-210ENST00000522466 NUP98P52948 1817 aa10.77□□□□□ -0.68
PDGFRB-210ENST00000522466 SHTN1A0MZ66 631 aa10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 SNRPA1P09661 255 aaKnown RBP10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 GPTP24298 496 aa10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 GMPSP49915 693 aaPredicted RBP10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 GPRC5DQ9NZD1 345 aa10.77□□□□□ -0.69
PDGFRB-210ENST00000522466 HIRAP54198 1017 aaPredicted RBP10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 HUNKP57058 714 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 CXCL9Q07325 125 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 MCM10Q7L590 875 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 TRPM4Q8TD43 1214 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
PDGFRB-210ENST00000522466 RAD17O75943 681 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 DCTN1Q14203 1278 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 CRY2Q49AN0 593 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 RBM17Q96I25 401 aaKnown RBP10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 NYXQ9GZU5 481 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 MIS18AQ9NYP9 233 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 AKAP11Q9UKA4 1901 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 CEMIPQ8WUJ3 1361 aa10.75□□□□□ -0.69
PDGFRB-210ENST00000522466 TRPA1O75762 1119 aa10.74□□□□□ -0.69
PDGFRB-210ENST00000522466 PRKAR2BP31323 418 aa10.74□□□□□ -0.69
PDGFRB-210ENST00000522466 TTLL7Q6ZT98 887 aa10.74□□□□□ -0.69
PDGFRB-210ENST00000522466 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-210ENST00000522466 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 KIF23Q02241 960 aaPredicted RBP10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 NOGQ13253 232 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 PRPF38BQ5VTL8 546 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 SUSD4Q5VX71 490 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 CDC37L1Q7L3B6 337 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 HHIPL1Q96JK4 782 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 ZNRF3Q9ULT6 936 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 RRP7AQ9Y3A4 280 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
PDGFRB-210ENST00000522466 MYL6BP14649 208 aa10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 RGMBQ6NW40 437 aa10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 TMX4Q9H1E5 349 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 CNOT7Q9UIV1 285 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 TAF1P21675 1872 aa10.72□□□□□ -0.69
PDGFRB-210ENST00000522466 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 FAM155AB1AL88 458 aaPredicted RBP10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 TBC1D10BQ4KMP7 808 aaPredicted RBP10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 KIF6Q6ZMV9 814 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms