RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 LRP10Q7Z4F1 713 aa28.26■■■□□ 2.11
HOXA3-205ENST00000522456 JMYQ8N9B5 988 aa28.26■■■□□ 2.11
HOXA3-205ENST00000522456 ZBTB3Q9H5J0 574 aa28.26■■■□□ 2.11
HOXA3-205ENST00000522456 AIMP1Q12904 312 aaKnown RBP28.25■■■□□ 2.11
HOXA3-205ENST00000522456 SOGA3Q5TF21 947 aa28.25■■■□□ 2.11
HOXA3-205ENST00000522456 COPS6Q7L5N1 327 aa28.25■■■□□ 2.11
HOXA3-205ENST00000522456 TSPYL6Q8N831 410 aa28.25■■■□□ 2.11
HOXA3-205ENST00000522456 FANCIQ9NVI1 1328 aa28.24■■■□□ 2.11
HOXA3-205ENST00000522456 CHMP4AQ9BY43 222 aa28.24■■■□□ 2.11
HOXA3-205ENST00000522456 NIP7Q9Y221 180 aaKnown RBP eCLIP28.24■■■□□ 2.11
HOXA3-205ENST00000522456 POTECB2RU33 542 aa28.23■■■□□ 2.11
HOXA3-205ENST00000522456 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
HOXA3-205ENST00000522456 XAGE3Q8WTP9 111 aa28.23■■■□□ 2.11
HOXA3-205ENST00000522456 MYH16Q9H6N6 1097 aa28.23■■■□□ 2.11
HOXA3-205ENST00000522456 SPINK5Q9NQ38 1064 aaPredicted RBP28.22■■■□□ 2.11
HOXA3-205ENST00000522456 HYPKQ9NX55 129 aa28.22■■■□□ 2.11
HOXA3-205ENST00000522456 TWISTNBQ3B726 338 aaPredicted RBP28.21■■■□□ 2.11
HOXA3-205ENST00000522456 CCDC30Q5VVM6 783 aa28.21■■■□□ 2.11
HOXA3-205ENST00000522456 ZNF521Q96K83 1311 aa28.2■■■□□ 2.11
HOXA3-205ENST00000522456 NPR1P16066 1061 aa28.19■■■□□ 2.1
HOXA3-205ENST00000522456 TPTE2Q6XPS3 522 aa28.19■■■□□ 2.1
HOXA3-205ENST00000522456 GIGYF2Q6Y7W6 1299 aaKnown RBP28.19■■■□□ 2.1
HOXA3-205ENST00000522456 NUP98P52948 1817 aa28.19■■■□□ 2.1
HOXA3-205ENST00000522456 FAM177BA6PVY3 158 aa28.18■■■□□ 2.1
HOXA3-205ENST00000522456 KLRG2A4D1S0 409 aaPredicted RBP28.17■■■□□ 2.1
HOXA3-205ENST00000522456 EXOSC9Q06265 439 aaKnown RBP28.17■■■□□ 2.1
HOXA3-205ENST00000522456 CCDC93Q567U6 631 aa28.17■■■□□ 2.1
HOXA3-205ENST00000522456 C7orf43Q8WVR3 580 aa28.17■■■□□ 2.1
HOXA3-205ENST00000522456 IBTKQ9P2D0 1353 aaPredicted RBP28.15■■■□□ 2.1
HOXA3-205ENST00000522456 DDNO94850 711 aaPredicted RBP28.15■■■□□ 2.1
HOXA3-205ENST00000522456 GPTP24298 496 aa28.15■■■□□ 2.1
HOXA3-205ENST00000522456 STK31Q9BXU1 1019 aa28.15■■■□□ 2.1
HOXA3-205ENST00000522456 NYXQ9GZU5 481 aa28.15■■■□□ 2.1
HOXA3-205ENST00000522456 PCNTO95613 3336 aa28.15■■■□□ 2.1
HOXA3-205ENST00000522456 TCERG1O14776 1098 aaKnown RBP28.14■■■□□ 2.1
HOXA3-205ENST00000522456 ANKRD13DQ6ZTN6 518 aa28.14■■■□□ 2.1
HOXA3-205ENST00000522456 PHAXQ9H814 394 aaKnown RBP28.14■■■□□ 2.1
HOXA3-205ENST00000522456 GTF2E1P29083 439 aaPredicted RBP28.13■■■□□ 2.09
HOXA3-205ENST00000522456 ZNF34Q8IZ26 560 aa28.13■■■□□ 2.09
HOXA3-205ENST00000522456 PLBD2Q8NHP8 589 aa28.13■■■□□ 2.09
HOXA3-205ENST00000522456 HSP90AB3PQ58FF7 597 aa28.12■■■□□ 2.09
HOXA3-205ENST00000522456 E9PSI1 815 aa28.11■■■□□ 2.09
HOXA3-205ENST00000522456 VAMP4O75379 141 aa28.11■■■□□ 2.09
HOXA3-205ENST00000522456 FKBP4Q02790 459 aaKnown RBP eCLIP28.11■■■□□ 2.09
HOXA3-205ENST00000522456 CHADLQ6NUI6 762 aa28.11■■■□□ 2.09
HOXA3-205ENST00000522456 PARP10Q53GL7 1025 aa28.1■■■□□ 2.09
HOXA3-205ENST00000522456 TCIRG1Q13488 830 aa28.09■■■□□ 2.09
HOXA3-205ENST00000522456 SUSD4Q5VX71 490 aa28.09■■■□□ 2.09
HOXA3-205ENST00000522456 UBN2Q6ZU65 1347 aa28.09■■■□□ 2.09
HOXA3-205ENST00000522456 IQCA1LA6NCM1 817 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 SLC4A2P04920 1241 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 POTEIP0CG38 1075 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 POTEJP0CG39 1038 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 COL13A1Q5TAT6 717 aaPredicted RBP28.08■■■□□ 2.09
HOXA3-205ENST00000522456 OLFM4Q6UX06 510 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 PPP1R42Q7Z4L9 355 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 RIC3Q7Z5B4 369 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 RTKN2Q8IZC4 609 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 L3MBTL3Q96JM7 780 aaPredicted RBP28.08■■■□□ 2.09
HOXA3-205ENST00000522456 ZNF277Q9NRM2 450 aaPredicted RBP28.08■■■□□ 2.09
HOXA3-205ENST00000522456 ABCC12Q96J65 1359 aa28.08■■■□□ 2.09
HOXA3-205ENST00000522456 ANKRD36CQ5JPF3 1778 aa28.07■■■□□ 2.08
HOXA3-205ENST00000522456 ALDH1B1P30837 517 aa28.07■■■□□ 2.08
HOXA3-205ENST00000522456 SLFN5Q08AF3 891 aa28.07■■■□□ 2.08
HOXA3-205ENST00000522456 CDCA7LQ96GN5 454 aa28.07■■■□□ 2.08
HOXA3-205ENST00000522456 RIC1Q4ADV7 1423 aa28.07■■■□□ 2.08
HOXA3-205ENST00000522456 DDX58O95786 925 aaKnown RBP28.06■■■□□ 2.08
HOXA3-205ENST00000522456 NUTM1Q86Y26 1132 aa28.06■■■□□ 2.08
HOXA3-205ENST00000522456 SCN4AP35499 1836 aa28.06■■■□□ 2.08
HOXA3-205ENST00000522456 RNF123Q5XPI4 1314 aa28.05■■■□□ 2.08
HOXA3-205ENST00000522456 ZNF541Q9H0D2 1346 aa28.05■■■□□ 2.08
HOXA3-205ENST00000522456 CRY2Q49AN0 593 aa28.04■■■□□ 2.08
HOXA3-205ENST00000522456 UTP14AQ9BVJ6 771 aaKnown RBP28.04■■■□□ 2.08
HOXA3-205ENST00000522456 CREBZFQ9NS37 354 aa28.04■■■□□ 2.08
HOXA3-205ENST00000522456 HSPA1AP0DMV8 641 aaKnown RBP28.03■■■□□ 2.08
HOXA3-205ENST00000522456 HSPA1BP0DMV9 641 aaKnown RBP28.03■■■□□ 2.08
HOXA3-205ENST00000522456 HNRNPUQ00839 825 aaKnown RBP eCLIP28.03■■■□□ 2.08
HOXA3-205ENST00000522456 NLRP10Q86W26 655 aa28.03■■■□□ 2.08
HOXA3-205ENST00000522456 LDHDQ86WU2 507 aa28.03■■■□□ 2.08
HOXA3-205ENST00000522456 TAF1DQ9H5J8 278 aaPredicted RBP28.03■■■□□ 2.08
HOXA3-205ENST00000522456 ATP5J2-PTCD1G3V325 749 aa28.02■■■□□ 2.08
HOXA3-205ENST00000522456 NTSR2O95665 410 aa28.02■■■□□ 2.08
HOXA3-205ENST00000522456 IARSP41252 1262 aaKnown RBP28.02■■■□□ 2.08
HOXA3-205ENST00000522456 G2E3Q7L622 706 aa28.02■■■□□ 2.08
HOXA3-205ENST00000522456 SNED1Q8TER0 1413 aa28.01■■■□□ 2.08
HOXA3-205ENST00000522456 SYNE4Q8N205 404 aa28■■■□□ 2.07
HOXA3-205ENST00000522456 ZNF428Q96B54 188 aa28■■■□□ 2.07
HOXA3-205ENST00000522456 ISCA1Q9BUE6 129 aa28■■■□□ 2.07
HOXA3-205ENST00000522456 TRMT112Q9UI30 125 aaKnown RBP28■■■□□ 2.07
HOXA3-205ENST00000522456 KSR2Q6VAB6 950 aa27.99■■■□□ 2.07
HOXA3-205ENST00000522456 RPGRQ92834 1020 aaKnown RBP27.99■■■□□ 2.07
HOXA3-205ENST00000522456 PSMD1Q99460 953 aa27.99■■■□□ 2.07
HOXA3-205ENST00000522456 MYD88Q99836 296 aa27.99■■■□□ 2.07
HOXA3-205ENST00000522456 MAP3K2Q9Y2U5 619 aa27.99■■■□□ 2.07
HOXA3-205ENST00000522456 PI4KAP2A4QPH2 592 aa27.98■■■□□ 2.07
HOXA3-205ENST00000522456 PI4KAP1Q8N8J0 262 aa27.98■■■□□ 2.07
HOXA3-205ENST00000522456 HACL1Q9UJ83 578 aa27.98■■■□□ 2.07
HOXA3-205ENST00000522456 PASKQ96RG2 1323 aa27.97■■■□□ 2.07
HOXA3-205ENST00000522456 FZD9O00144 591 aa27.97■■■□□ 2.07
HOXA3-205ENST00000522456 FLIIQ13045 1269 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms