RNA–Protein interactions for RNA: ENST00000522299.5

CLU-211, Transcript of clusterin, humanhuman

TSL 2

Gene CLU, Length 2,807 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-211ENST00000522299 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
CLU-211ENST00000522299 SLIT2O94813 1529 aa13.18□□□□□ -0.3
CLU-211ENST00000522299 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
CLU-211ENST00000522299 SIK1P57059 783 aa13.18□□□□□ -0.3
CLU-211ENST00000522299 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
CLU-211ENST00000522299 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
CLU-211ENST00000522299 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
CLU-211ENST00000522299 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 MBD3O95983 291 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
CLU-211ENST00000522299 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
CLU-211ENST00000522299 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
CLU-211ENST00000522299 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
CLU-211ENST00000522299 USP44Q9H0E7 712 aa13.16□□□□□ -0.3
CLU-211ENST00000522299 OTUD7AQ8TE49 926 aaPredicted RBP13.16□□□□□ -0.3
CLU-211ENST00000522299 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
CLU-211ENST00000522299 IL1RAPL2Q9NP60 686 aa13.16□□□□□ -0.3
CLU-211ENST00000522299 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
CLU-211ENST00000522299 RXRBP28702 533 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
CLU-211ENST00000522299 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLU-211ENST00000522299 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
CLU-211ENST00000522299 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.31
CLU-211ENST00000522299 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
CLU-211ENST00000522299 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
CLU-211ENST00000522299 ADCY9O60503 1353 aa13.14□□□□□ -0.31
CLU-211ENST00000522299 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
CLU-211ENST00000522299 TMEM63CQ9P1W3 806 aa13.14□□□□□ -0.31
CLU-211ENST00000522299 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
CLU-211ENST00000522299 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
CLU-211ENST00000522299 GNPATO15228 680 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
CLU-211ENST00000522299 APBA3O96018 575 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 USP54Q70EL1 1684 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
CLU-211ENST00000522299 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
CLU-211ENST00000522299 A0A087WZG4 1122 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 ABCC4O15439 1325 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 ST18O60284 1047 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 STARD3NLO95772 234 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 CYP19A1P11511 503 aaPredicted RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 BEND3Q5T5X7 828 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 RGS12O14924 1447 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
CLU-211ENST00000522299 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
CLU-211ENST00000522299 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
CLU-211ENST00000522299 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 SYAP1Q96A49 352 aaPredicted RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 ZNF594Q96JF6 807 aaPredicted RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
CLU-211ENST00000522299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLU-211ENST00000522299 BCL9O00512 1426 aa13.11□□□□□ -0.31
CLU-211ENST00000522299 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 TSPY26PQ9H489 355 aa13.11□□□□□ -0.31
CLU-211ENST00000522299 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
CLU-211ENST00000522299 SYCE3A1L190 88 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
CLU-211ENST00000522299 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
CLU-211ENST00000522299 SNAP23O00161 211 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 NPHP1O15259 732 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
CLU-211ENST00000522299 FAM196AQ6ZSG2 479 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
CLU-211ENST00000522299 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms