RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 PTH1RQ03431 593 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 AK9Q5TCS8 1911 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
SMIM12-206ENST00000521580 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
SMIM12-206ENST00000521580 GLI3P10071 1580 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
SMIM12-206ENST00000521580 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
SMIM12-206ENST00000521580 HIP1O00291 1037 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 FOXO4P98177 505 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
SMIM12-206ENST00000521580 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
SMIM12-206ENST00000521580 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
SMIM12-206ENST00000521580 A0A0G2JS52 829 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 PTMSP20962 102 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
SMIM12-206ENST00000521580 SKOR2Q2VWA4 1001 aaPredicted RBP16.89■□□□□ 0.29
SMIM12-206ENST00000521580 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 TNS2Q63HR2 1409 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 COL15A1P39059 1388 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 EXOC5O00471 708 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 STARD3NLO95772 234 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 IL17RAQ96F46 866 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
SMIM12-206ENST00000521580 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
SMIM12-206ENST00000521580 AFDNP55196 1824 aaKnown RBP16.88■□□□□ 0.29
SMIM12-206ENST00000521580 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
SMIM12-206ENST00000521580 KIF6Q6ZMV9 814 aa16.88■□□□□ 0.29
SMIM12-206ENST00000521580 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
SMIM12-206ENST00000521580 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
SMIM12-206ENST00000521580 KAT6BQ8WYB5 2073 aa16.88■□□□□ 0.29
SMIM12-206ENST00000521580 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
SMIM12-206ENST00000521580 CPA1P15085 419 aa16.88■□□□□ 0.29
SMIM12-206ENST00000521580 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
SMIM12-206ENST00000521580 CUL4AQ13619 759 aa16.88■□□□□ 0.29
SMIM12-206ENST00000521580 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
SMIM12-206ENST00000521580 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
SMIM12-206ENST00000521580 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
SMIM12-206ENST00000521580 ATP5JP18859 108 aa16.87■□□□□ 0.29
SMIM12-206ENST00000521580 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
SMIM12-206ENST00000521580 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
SMIM12-206ENST00000521580 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
SMIM12-206ENST00000521580 JAKMIP1Q96N16 626 aaKnown RBP16.87■□□□□ 0.29
SMIM12-206ENST00000521580 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
SMIM12-206ENST00000521580 RBM8AQ9Y5S9 174 aaKnown RBP16.86■□□□□ 0.29
SMIM12-206ENST00000521580 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
SMIM12-206ENST00000521580 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
SMIM12-206ENST00000521580 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
SMIM12-206ENST00000521580 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
SMIM12-206ENST00000521580 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
SMIM12-206ENST00000521580 AK2P54819 239 aa16.85■□□□□ 0.29
SMIM12-206ENST00000521580 NCLP19338 710 aaKnown RBP16.84■□□□□ 0.29
SMIM12-206ENST00000521580 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 TIMM10P62072 90 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 ATG9AQ7Z3C6 839 aa16.84■□□□□ 0.29
SMIM12-206ENST00000521580 GPTP24298 496 aa16.83■□□□□ 0.29
SMIM12-206ENST00000521580 IL15P40933 162 aaPredicted RBP16.83■□□□□ 0.29
SMIM12-206ENST00000521580 CHAMP1Q96JM3 812 aa16.83■□□□□ 0.29
SMIM12-206ENST00000521580 TTC14Q96N46 770 aa16.83■□□□□ 0.29
SMIM12-206ENST00000521580 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
SMIM12-206ENST00000521580 PDRG1Q9NUG6 133 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 EYA2O00167 538 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
SMIM12-206ENST00000521580 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
SMIM12-206ENST00000521580 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
SMIM12-206ENST00000521580 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
SMIM12-206ENST00000521580 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 PUS3Q9BZE2 481 aaKnown RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
SMIM12-206ENST00000521580 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
SMIM12-206ENST00000521580 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
SMIM12-206ENST00000521580 HAUS7Q99871 368 aa16.81■□□□□ 0.28
SMIM12-206ENST00000521580 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
SMIM12-206ENST00000521580 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
SMIM12-206ENST00000521580 MAP3K15Q6ZN16 1313 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms