RNA–Protein interactions for RNA: ENST00000520917.1

PTK2-226, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-226ENST00000520917 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTK2-226ENST00000520917 NUP98P52948 1817 aa18.12■□□□□ 0.49
PTK2-226ENST00000520917 FAM155AB1AL88 458 aaPredicted RBP18.11■□□□□ 0.49
PTK2-226ENST00000520917 TRPA1O75762 1119 aa18.11■□□□□ 0.49
PTK2-226ENST00000520917 HUNKP57058 714 aa18.11■□□□□ 0.49
PTK2-226ENST00000520917 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
PTK2-226ENST00000520917 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
PTK2-226ENST00000520917 TRPM4Q8TD43 1214 aa18.11■□□□□ 0.49
PTK2-226ENST00000520917 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
PTK2-226ENST00000520917 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
PTK2-226ENST00000520917 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
PTK2-226ENST00000520917 NIM1KQ8IY84 436 aa18.1■□□□□ 0.49
PTK2-226ENST00000520917 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
PTK2-226ENST00000520917 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
PTK2-226ENST00000520917 MKI67P46013 3256 aaKnown RBP18.09■□□□□ 0.49
PTK2-226ENST00000520917 AOC3Q16853 763 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 PANK3Q9H999 370 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
PTK2-226ENST00000520917 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
PTK2-226ENST00000520917 KIF23Q02241 960 aaPredicted RBP18.08■□□□□ 0.48
PTK2-226ENST00000520917 CXCL9Q07325 125 aa18.08■□□□□ 0.48
PTK2-226ENST00000520917 HLFQ16534 295 aa18.08■□□□□ 0.48
PTK2-226ENST00000520917 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.48
PTK2-226ENST00000520917 CLEC4GQ6UXB4 293 aa18.08■□□□□ 0.48
PTK2-226ENST00000520917 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
PTK2-226ENST00000520917 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
PTK2-226ENST00000520917 TEFQ10587 303 aa18.07■□□□□ 0.48
PTK2-226ENST00000520917 CTU1Q7Z7A3 348 aaKnown RBP18.07■□□□□ 0.48
PTK2-226ENST00000520917 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
PTK2-226ENST00000520917 PGAP2Q9UHJ9 254 aa18.07■□□□□ 0.48
PTK2-226ENST00000520917 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
PTK2-226ENST00000520917 SAGE1Q9NXZ1 904 aa18.06■□□□□ 0.48
PTK2-226ENST00000520917 ZNF652Q9Y2D9 606 aa18.06■□□□□ 0.48
PTK2-226ENST00000520917 RGMBQ6NW40 437 aa18.05■□□□□ 0.48
PTK2-226ENST00000520917 TAF1P21675 1872 aa18.05■□□□□ 0.48
PTK2-226ENST00000520917 NBPF26B4DH59 902 aa18.04■□□□□ 0.48
PTK2-226ENST00000520917 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
PTK2-226ENST00000520917 NBPF10Q6P3W6 841 aaKnown RBP18.04■□□□□ 0.48
PTK2-226ENST00000520917 NBPF15Q8N660 670 aa18.04■□□□□ 0.48
PTK2-226ENST00000520917 LAMB2P55268 1798 aa18.04■□□□□ 0.48
PTK2-226ENST00000520917 PPEF1O14829 653 aaPredicted RBP18.03■□□□□ 0.48
PTK2-226ENST00000520917 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
PTK2-226ENST00000520917 C3orf67Q6ZVT6 689 aa18.03■□□□□ 0.48
PTK2-226ENST00000520917 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
PTK2-226ENST00000520917 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
PTK2-226ENST00000520917 RAD17O75943 681 aa18.02■□□□□ 0.48
PTK2-226ENST00000520917 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
PTK2-226ENST00000520917 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
PTK2-226ENST00000520917 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.47
PTK2-226ENST00000520917 ADM5C9JUS6 153 aa18.01■□□□□ 0.47
PTK2-226ENST00000520917 ZNF157P51786 506 aaPredicted RBP18.01■□□□□ 0.47
PTK2-226ENST00000520917 GCC1Q96CN9 775 aa18.01■□□□□ 0.47
PTK2-226ENST00000520917 EGFRP00533 1210 aa18■□□□□ 0.47
PTK2-226ENST00000520917 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
PTK2-226ENST00000520917 GBA2Q9HCG7 927 aaPredicted RBP18■□□□□ 0.47
PTK2-226ENST00000520917 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
PTK2-226ENST00000520917 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
PTK2-226ENST00000520917 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
PTK2-226ENST00000520917 HOXA10P31260 410 aaPredicted RBP17.99■□□□□ 0.47
PTK2-226ENST00000520917 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTK2-226ENST00000520917 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
PTK2-226ENST00000520917 CNOT7Q9UIV1 285 aaKnown RBP17.99■□□□□ 0.47
PTK2-226ENST00000520917 PAPPA2Q9BXP8 1791 aa17.99■□□□□ 0.47
PTK2-226ENST00000520917 SLC10A3P09131 477 aa17.98■□□□□ 0.47
PTK2-226ENST00000520917 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
PTK2-226ENST00000520917 CEMIPQ8WUJ3 1361 aa17.98■□□□□ 0.47
PTK2-226ENST00000520917 YDJCA8MPS7 323 aa17.97■□□□□ 0.47
PTK2-226ENST00000520917 GPTP24298 496 aa17.97■□□□□ 0.47
PTK2-226ENST00000520917 MICALL2Q8IY33 904 aa17.97■□□□□ 0.47
PTK2-226ENST00000520917 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
PTK2-226ENST00000520917 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
PTK2-226ENST00000520917 HTTP42858 3142 aa17.96■□□□□ 0.47
PTK2-226ENST00000520917 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
PTK2-226ENST00000520917 TBC1D10BQ4KMP7 808 aaPredicted RBP17.96■□□□□ 0.47
PTK2-226ENST00000520917 KRT26Q7Z3Y9 468 aa17.96■□□□□ 0.47
PTK2-226ENST00000520917 NGEFQ8N5V2 710 aa17.96■□□□□ 0.47
PTK2-226ENST00000520917 CCDC102AQ96A19 550 aa17.96■□□□□ 0.47
PTK2-226ENST00000520917 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
PTK2-226ENST00000520917 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.46
PTK2-226ENST00000520917 C2orf69Q8N8R5 385 aa17.95■□□□□ 0.46
PTK2-226ENST00000520917 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
PTK2-226ENST00000520917 CRAMP1Q96RY5 1269 aa17.95■□□□□ 0.46
PTK2-226ENST00000520917 CDHR2Q9BYE9 1310 aa17.95■□□□□ 0.46
PTK2-226ENST00000520917 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
PTK2-226ENST00000520917 CENPFP49454 3210 aa17.94■□□□□ 0.46
PTK2-226ENST00000520917 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
PTK2-226ENST00000520917 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
PTK2-226ENST00000520917 SUSD4Q5VX71 490 aa17.94■□□□□ 0.46
PTK2-226ENST00000520917 NYXQ9GZU5 481 aa17.94■□□□□ 0.46
PTK2-226ENST00000520917 SZT2Q5T011 3432 aa17.94■□□□□ 0.46
PTK2-226ENST00000520917 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
PTK2-226ENST00000520917 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
PTK2-226ENST00000520917 RASAL3Q86YV0 1011 aa17.93■□□□□ 0.46
PTK2-226ENST00000520917 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
PTK2-226ENST00000520917 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
PTK2-226ENST00000520917 ASTN2O75129 1339 aaPredicted RBP17.93■□□□□ 0.46
PTK2-226ENST00000520917 ANKRD36CQ5JPF3 1778 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms