RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SMC2O95347 1197 aa15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 ARID5BQ14865 1188 aa15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 LEO1Q8WVC0 666 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 GUCY1B3Q02153 619 aa15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 KRT222Q8N1A0 295 aa15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-208ENST00000520857 ME1P48163 572 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 ERCC4Q92889 916 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 ANKRD7Q92527 254 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 BRF1Q92994 677 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 CCDC66A2RUB6 948 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 JAK2O60674 1132 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 EVI5LQ96CN4 794 aa15.1■□□□□ 0.01
TRAPPC9-208ENST00000520857 ELF2Q15723 593 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 CCDC69A6NI79 296 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 CLSTN2Q9H4D0 955 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
TRAPPC9-208ENST00000520857 DNAJC2Q99543 621 aaKnown RBP15.08■□□□□ 0
TRAPPC9-208ENST00000520857 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
TRAPPC9-208ENST00000520857 EPB41L2O43491 1005 aaKnown RBP15.08■□□□□ 0
TRAPPC9-208ENST00000520857 CCDC144BQ3MJ40 725 aa15.08■□□□□ 0
TRAPPC9-208ENST00000520857 CCDC144CPQ8IYA2 1237 aa15.08■□□□□ 0
TRAPPC9-208ENST00000520857 CFAP45Q9UL16 551 aa15.08■□□□□ 0
TRAPPC9-208ENST00000520857 SLC27A2O14975 620 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 LMOD2Q6P5Q4 547 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 CCAR1Q8IX12 1150 aaKnown RBP15.07■□□□□ 0
TRAPPC9-208ENST00000520857 IL17REQ8NFR9 667 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 CTNNA3Q9UI47 895 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 HIP1O00291 1037 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 ZNF397Q8NF99 534 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-208ENST00000520857 METP08581 1390 aa15.07■□□□□ 0
TRAPPC9-208ENST00000520857 CTIFO43310 598 aaKnown RBP15.06■□□□□ 0
TRAPPC9-208ENST00000520857 CEP57L1Q8IYX8 460 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 TTC41PQ6P2S7 1318 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 USP27XA6NNY8 438 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
TRAPPC9-208ENST00000520857 OSCARQ8IYS5 282 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-208ENST00000520857 CPS1P31327 1500 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 CRB1P82279 1406 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
TRAPPC9-208ENST00000520857 AOPEPQ8N6M6 819 aa15.06■□□□□ 0
TRAPPC9-208ENST00000520857 BIN1O00499 593 aa15.05■□□□□ 0
TRAPPC9-208ENST00000520857 CCT2P78371 535 aaKnown RBP15.05■□□□□ 0
TRAPPC9-208ENST00000520857 TAF3Q5VWG9 929 aa15.05■□□□□ 0
TRAPPC9-208ENST00000520857 HDAC5Q9UQL6 1122 aa15.05■□□□□ 0
TRAPPC9-208ENST00000520857 ALKQ9UM73 1620 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 STX1AQ16623 288 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 GTF3C6Q969F1 213 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
TRAPPC9-208ENST00000520857 TM6SF1Q9BZW5 370 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 ZBTB22O15209 634 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 GABPB1Q06547 395 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-208ENST00000520857 MNS1Q8NEH6 495 aa15.05■□□□□ -0
TRAPPC9-208ENST00000520857 VGLL3A8MV65 326 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 LRRC8AQ8IWT6 810 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 CCAR2Q8N163 923 aaKnown RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 FSIP1Q8NA03 581 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 NAT10Q9H0A0 1025 aaKnown RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 A0A0D9SFI3 127 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 PIK3C2BO00750 1634 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 POLR3GO15318 223 aaPredicted RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 TPM4P67936 248 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 C11orf57Q6ZUT1 292 aaPredicted RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 ABTB2Q8N961 1025 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 TDRD7Q8NHU6 1098 aaKnown RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 SLU7O95391 586 aaKnown RBP15.04■□□□□ -0
TRAPPC9-208ENST00000520857 KLHDC4Q8TBB5 520 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 FTOQ9C0B1 505 aaKnown RBP eCLIP15.04■□□□□ -01e-10■■■■■ 27.2
TRAPPC9-208ENST00000520857 ANO10Q9NW15 660 aa15.04■□□□□ -0
TRAPPC9-208ENST00000520857 CDC42BPGQ6DT37 1551 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 ISM2Q6H9L7 571 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 DDX41Q9UJV9 622 aaKnown RBP15.03■□□□□ -0
TRAPPC9-208ENST00000520857 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
TRAPPC9-208ENST00000520857 RPS6KB1P23443 525 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 TMC6Q7Z403 805 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 CHMP4AQ9BY43 222 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 BTBD11A6QL63 1104 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 NEMFO60524 1076 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 NECTIN1Q15223 517 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 Q6ZUG5 572 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 PGBD1Q96JS3 809 aa15.03■□□□□ -0
TRAPPC9-208ENST00000520857 FLT4P35916 1363 aa15.02■□□□□ -0
TRAPPC9-208ENST00000520857 KIF20BQ96Q89 1820 aa15.02■□□□□ -0
TRAPPC9-208ENST00000520857 KCNQ3O43525 872 aa15.02■□□□□ -0
TRAPPC9-208ENST00000520857 SFPQP23246 707 aaKnown RBP eCLIP15.02■□□□□ -0
TRAPPC9-208ENST00000520857 COL9A3Q14050 684 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms