RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 HOXB7P09629 217 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 TRPM3Q9HCF6 1732 aaPredicted RBP16.6■□□□□ 0.25
PCDHA2-202ENST00000520672 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
PCDHA2-202ENST00000520672 MYD88Q99836 296 aa16.59■□□□□ 0.25
PCDHA2-202ENST00000520672 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
PCDHA2-202ENST00000520672 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
PCDHA2-202ENST00000520672 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.25
PCDHA2-202ENST00000520672 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 USP54Q70EL1 1684 aa16.58■□□□□ 0.24
PCDHA2-202ENST00000520672 TNNT3P45378 269 aaPredicted RBP16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 ZNF445P59923 1031 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 HMGN5P82970 282 aaKnown RBP16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 CCDC66A2RUB6 948 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 MCM5P33992 734 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 NUCB2P80303 420 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 PDIA6Q15084 440 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 RABEP1Q15276 862 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
PCDHA2-202ENST00000520672 PRIMPOLQ96LW4 560 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 LOC102724159A0A0B4J2E5 919 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 PWP2Q15269 919 aaKnown RBP16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 SUCLG2Q96I99 432 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 IBTKQ9P2D0 1353 aaPredicted RBP16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 SYCE3A1L190 88 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 ANO2Q9NQ90 1003 aa16.56■□□□□ 0.24
PCDHA2-202ENST00000520672 SLFN14P0C7P3 912 aa16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
PCDHA2-202ENST00000520672 PLCB2Q00722 1185 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 GRM8O00222 908 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 TTC12Q9H892 705 aaPredicted RBP16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 A1BGP04217 495 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 ANKRD13DQ6ZTN6 518 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 DCCP43146 1447 aa16.54■□□□□ 0.24
PCDHA2-202ENST00000520672 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 LMTK3Q96Q04 1460 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 ERC2O15083 957 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 SLC20A2Q08357 652 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 HOMEZQ8IX15 550 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 TMEM63CQ9P1W3 806 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
PCDHA2-202ENST00000520672 NCAPD2Q15021 1401 aa16.52■□□□□ 0.24
PCDHA2-202ENST00000520672 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.24
PCDHA2-202ENST00000520672 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
PCDHA2-202ENST00000520672 IL2RBP14784 551 aa16.52■□□□□ 0.23
PCDHA2-202ENST00000520672 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.23
PCDHA2-202ENST00000520672 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.23
PCDHA2-202ENST00000520672 ZDHHC9Q9Y397 364 aa16.52■□□□□ 0.23
PCDHA2-202ENST00000520672 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.23
PCDHA2-202ENST00000520672 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 SOS2Q07890 1332 aaPredicted RBP16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 POLA2Q14181 598 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 ST18O60284 1047 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 REC8O95072 547 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 IL25Q9H293 177 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 OGFRQ9NZT2 677 aa16.51■□□□□ 0.23
PCDHA2-202ENST00000520672 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 AACSQ86V21 672 aa16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
PCDHA2-202ENST00000520672 IFIT2P09913 472 aaKnown RBP16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 CAMTA1Q9Y6Y1 1673 aa16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
PCDHA2-202ENST00000520672 NEURL1BA8MQ27 555 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms