RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
VAPB-206ENST00000520497 GCKRQ14397 625 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 CENPQQ7L2Z9 268 aaPredicted RBP10.7□□□□□ -0.7
VAPB-206ENST00000520497 SIRT2Q8IXJ6 389 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 ISCA1Q9BUE6 129 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 SPON1Q9HCB6 807 aa10.7□□□□□ -0.7
VAPB-206ENST00000520497 A0A087WZG4 1122 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 GRM8O00222 908 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 CAMTA2O94983 1202 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 GNAI2P04899 355 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 UBTFL1P0CB47 393 aaPredicted RBP10.69□□□□□ -0.7
VAPB-206ENST00000520497 PTGER2P43116 358 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 HLFQ16534 295 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 ANKRD44Q8N8A2 993 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 LRRFIP2Q9Y608 721 aaKnown RBP10.69□□□□□ -0.7
VAPB-206ENST00000520497 SPEF2Q9C093 1822 aa10.69□□□□□ -0.7
VAPB-206ENST00000520497 GNPATO15228 680 aa10.68□□□□□ -0.7
VAPB-206ENST00000520497 HMGB2P26583 209 aaKnown RBP10.68□□□□□ -0.7
VAPB-206ENST00000520497 ZNF827Q17R98 1081 aa10.68□□□□□ -0.7
VAPB-206ENST00000520497 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
VAPB-206ENST00000520497 NPM2Q86SE8 214 aaKnown RBP10.68□□□□□ -0.7
VAPB-206ENST00000520497 AMIGO3Q86WK7 504 aa10.68□□□□□ -0.7
VAPB-206ENST00000520497 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
VAPB-206ENST00000520497 RWDD1Q9H446 243 aaPredicted RBP10.68□□□□□ -0.7
VAPB-206ENST00000520497 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
VAPB-206ENST00000520497 TBC1D2BQ9UPU7 963 aa10.68□□□□□ -0.7
VAPB-206ENST00000520497 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 CASP7P55210 303 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 MTX1Q13505 466 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 CLEC4GQ6UXB4 293 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 KAZALD1Q96I82 304 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 CWC25Q9NXE8 425 aaPredicted RBP10.67□□□□□ -0.7
VAPB-206ENST00000520497 C9orf78Q9NZ63 289 aaPredicted RBP10.67□□□□□ -0.7
VAPB-206ENST00000520497 RTCBQ9Y3I0 505 aaKnown RBP10.67□□□□□ -0.7
VAPB-206ENST00000520497 NRXN2Q9P2S2 1712 aa10.67□□□□□ -0.7
VAPB-206ENST00000520497 TAF1P21675 1872 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 UBN2Q6ZU65 1347 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 H7C1W4 665 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 SMC5Q8IY18 1101 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 AK7Q96M32 723 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 NARFQ9UHQ1 456 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 A0A1B0GUL6 1792 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
VAPB-206ENST00000520497 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
VAPB-206ENST00000520497 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
VAPB-206ENST00000520497 SSFA2P28290 1259 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 ATP8B2P98198 1209 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 POLA2Q14181 598 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 UBE3BQ7Z3V4 1068 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 SUCLG2Q96I99 432 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 ZNF652Q9Y2D9 606 aa10.65□□□□□ -0.7
VAPB-206ENST00000520497 CDHR2Q9BYE9 1310 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 ANKRD31Q8N7Z5 1873 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 ZBTB22O15209 634 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 HMMRO75330 724 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 RABL6Q3YEC7 729 aaPredicted RBP10.64□□□□□ -0.71
VAPB-206ENST00000520497 SMIM5Q71RC9 77 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 SSH3Q8TE77 659 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
VAPB-206ENST00000520497 ARXQ96QS3 562 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 BICC1Q9H694 974 aaKnown RBP10.64□□□□□ -0.71
VAPB-206ENST00000520497 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
VAPB-206ENST00000520497 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
VAPB-206ENST00000520497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
VAPB-206ENST00000520497 GPTP24298 496 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 PARP10Q53GL7 1025 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 PPP1R42Q7Z4L9 355 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 ZBTB38Q8NAP3 1195 aaPredicted RBP10.63□□□□□ -0.71
VAPB-206ENST00000520497 GCC1Q96CN9 775 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 PLA2G12BQ9BX93 195 aa10.63□□□□□ -0.71
VAPB-206ENST00000520497 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
VAPB-206ENST00000520497 SRP68Q9UHB9 627 aaKnown RBP10.63□□□□□ -0.71
VAPB-206ENST00000520497 YY1P25490 414 aa10.62□□□□□ -0.71
VAPB-206ENST00000520497 FOXO4P98177 505 aa10.62□□□□□ -0.71
VAPB-206ENST00000520497 EPHA10Q5JZY3 1008 aa10.62□□□□□ -0.71
VAPB-206ENST00000520497 TRAPPC3LQ5T215 181 aa10.62□□□□□ -0.71
VAPB-206ENST00000520497 JARID2Q92833 1246 aaPredicted RBP10.62□□□□□ -0.71
VAPB-206ENST00000520497 NIP7Q9Y221 180 aaKnown RBP eCLIP10.62□□□□□ -0.71
VAPB-206ENST00000520497 SRGAP3O43295 1099 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 ZPR1O75312 459 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 PHF14O94880 888 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 NTSR2O95665 410 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 RFC4P35249 363 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 SUSD4Q5VX71 490 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 FAM89AQ96GI7 184 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
VAPB-206ENST00000520497 CACNA1SQ13698 1873 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms