RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SOGA3Q5TF21 947 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 RIC3Q7Z5B4 369 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 NBPF5PQ86XG9 351 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 CNBD1Q8NA66 436 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 CHMP4BQ9H444 224 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 IBTKQ9P2D0 1353 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-220ENST00000520260 UBR3Q6ZT12 1888 aa7.15□□□□□ -1.27
CTNNA1-220ENST00000520260 GRIN3BO60391 1043 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 A1BGP04217 495 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 PTPRCP08575 1304 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 GYS1P13807 737 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 ALDH1L2Q3SY69 923 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 GRIPAP1Q4V328 841 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 ANKRD13DQ6ZTN6 518 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 CASZ1Q86V15 1759 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 PLBD2Q8NHP8 589 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 ATP10DQ9P241 1426 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 NIP7Q9Y221 180 aaKnown RBP eCLIP7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 USP16Q9Y5T5 823 aa7.14□□□□□ -1.27
CTNNA1-220ENST00000520260 FAM205CA6NFA0 338 aa7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 H0YIN7 160 aa7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 FKBP5Q13451 457 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 TSR2Q969E8 191 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 SLC4A9Q96Q91 983 aa7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 CHPF2Q9P2E5 772 aa7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 TBC1D2BQ9UPU7 963 aa7.13□□□□□ -1.27
CTNNA1-220ENST00000520260 SCN7AQ01118 1682 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 ELL2O00472 640 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 KCNQ3O43525 872 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 PRKCSHP14314 528 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 EXOSC9Q06265 439 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 AIMP1Q12904 312 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 COPS6Q7L5N1 327 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 TMC4Q7Z404 712 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 UTP14AQ9BVJ6 771 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 API5Q9BZZ5 524 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-220ENST00000520260 SH3TC1Q8TE82 1336 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 ZNF521Q96K83 1311 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 CAMTA2O94983 1202 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 SERPINB2P05120 415 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 ALDH1B1P30837 517 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 SLFN5Q08AF3 891 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 GPR162Q16538 588 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 KSR2Q6VAB6 950 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 BICDL1Q6ZP65 573 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 CCDC191Q8NCU4 936 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 XAGE3Q8WTP9 111 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 NECTIN2Q92692 538 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 RPGRQ92834 1020 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 CNKSR1Q969H4 720 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 BRIP1Q9BX63 1249 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 ZBTB3Q9H5J0 574 aa7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 CWC25Q9NXE8 425 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-220ENST00000520260 RIC1Q4ADV7 1423 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 C4AP0C0L4 1744 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 CACNA1FO60840 1977 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 PLCG2P16885 1265 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 FLIIQ13045 1269 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 TCIRG1Q13488 830 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 NFIXQ14938 502 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 FTSJ3Q8IY81 847 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 RBM17Q96I25 401 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 NLRP3Q96P20 1036 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 FHDC1Q9C0D6 1143 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 PIM2Q9P1W9 311 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 SRP68Q9UHB9 627 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 TRMT112Q9UI30 125 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 C10orf71Q711Q0 1435 aa7.1□□□□□ -1.27
CTNNA1-220ENST00000520260 TUBGCP6Q96RT7 1819 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 NBPF26B4DH59 902 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 POLRMTO00411 1230 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 TM4SF1P30408 202 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 PTGER2P43116 358 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 CCT4P50991 539 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 DALRD3Q5D0E6 543 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 NBPF10Q6P3W6 841 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 NBPF15Q8N660 670 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 C8orf58Q8NAV2 365 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 LINS1Q8NG48 757 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 DNAAF4Q8WXU2 420 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 ARHGAP45Q92619 1136 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 MASTLQ96GX5 879 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 BCORQ6W2J9 1755 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 PXDNLA1KZ92 1463 aa7.09□□□□□ -1.27
CTNNA1-220ENST00000520260 PRAMEF22A3QJZ6 481 aa7.08□□□□□ -1.28
CTNNA1-220ENST00000520260 VAMP4O75379 141 aa7.08□□□□□ -1.28
CTNNA1-220ENST00000520260 ALDH1L1O75891 902 aa7.08□□□□□ -1.28
CTNNA1-220ENST00000520260 NPR1P16066 1061 aa7.08□□□□□ -1.28
CTNNA1-220ENST00000520260 CCDC152Q4G0S7 254 aa7.08□□□□□ -1.28
CTNNA1-220ENST00000520260 TBC1D9BQ66K14 1250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms