RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	RAPGEFL1	Q9UHV5	662 aa		10.91	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	STXBP5L	Q9Y2K9	1186 aa		10.91	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	TRIM17	Q9Y577	477 aa		10.91	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	KIF24	Q5T7B8	1368 aa		10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	CANX	P27824	592 aa	Known RBP	10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	HIRA	P54198	1017 aa	Predicted RBP	10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	NOM1	Q5C9Z4	860 aa	Known RBP	10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	RASAL3	Q86YV0	1011 aa		10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	TRPM4	Q8TD43	1214 aa		10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	EYA1	Q99502	592 aa		10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	GGNBP2	Q9H3C7	697 aa		10.9	□□□□□ -0.66
RUNX1T1-223	ENST00000520172	CACNA1A	O00555	2505 aa		10.9	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	WASHC2A	Q641Q2	1341 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	GMPS	P49915	693 aa	Predicted RBP	10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	NIM1K	Q8IY84	436 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	NFATC2IP	Q8NCF5	419 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	FAM122A	Q96E09	287 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	TMEM106C	Q9BVX2	250 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	SNED1	Q8TER0	1413 aa		10.89	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ANKRD13D	Q6ZTN6	518 aa		10.88	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	KRT26	Q7Z3Y9	468 aa		10.88	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	DEFB123	Q8N688	67 aa		10.88	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	SETDB2	Q96T68	719 aa		10.88	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	PRO3102	Q9H379	93 aa		10.88	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ERBB4	Q15303	1308 aa		10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	OTOP1	Q7RTM1	612 aa		10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	EMILIN1	Q9Y6C2	1016 aa		10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ROCK2	O75116	1388 aa	Known RBP	10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	NPC1L1	Q9UHC9	1359 aa		10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	MUC3A	Q02505	3323 aa		10.87	□□□□□ -0.67
RUNX1T1-223	ENST00000520172		A0A087WZG4	1122 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ST20-MTHFS	A0A0A6YYL1	179 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ADM5	C9JUS6	153 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	PPM1G	O15355	546 aa	Predicted RBP	10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	MTHFS	P49914	203 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172		Q7L0L9	218 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	DPF3	Q92784	378 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ARMC5	Q96C12	935 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	BCL2L13	Q9BXK5	485 aa		10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	POLR2A	P24928	1970 aa	Known RBP	10.86	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	CDHR2	Q9BYE9	1310 aa		10.85	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	HOXD11	P31277	338 aa	Predicted RBP	10.85	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	TBC1D2B	Q9UPU7	963 aa		10.85	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	MRC1	P22897	1456 aa		10.85	□□□□□ -0.67
RUNX1T1-223	ENST00000520172		A0A1W2PPC1	479 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	FYB1	O15117	783 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	PPIP5K2	O43314	1243 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	ALDH1B1	P30837	517 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	EIF5	P55010	431 aa	Known RBP	10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	CXCL9	Q07325	125 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	SLC4A8	Q2Y0W8	1093 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	R3HDML	Q9H3Y0	253 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	RAB3GAP2	Q9H2M9	1393 aa		10.84	□□□□□ -0.67
RUNX1T1-223	ENST00000520172	EYS	Q5T1H1	3165 aa		10.83	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SHTN1	A0MZ66	631 aa		10.83	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	PTPN22	Q9Y2R2	807 aa		10.83	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	KIF20B	Q96Q89	1820 aa		10.83	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	KLRG2	A4D1S0	409 aa	Predicted RBP	10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172		H7C1D1	291 aa		10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	AOC3	Q16853	763 aa		10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	C1orf141	Q5JVX7	400 aa		10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	CC2D2B	Q6DHV5	1058 aa		10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	CNOT7	Q9UIV1	285 aa	Known RBP	10.82	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	MICALL2	Q8IY33	904 aa		10.81	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	DCPS	Q96C86	337 aa	Known RBP	10.81	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	ZNF333	Q96JL9	665 aa		10.81	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	MTMR10	Q9NXD2	777 aa		10.81	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	ZNRF3	Q9ULT6	936 aa		10.81	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	PRUNE2	Q8WUY3	3088 aa		10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	MYC	P01106	439 aa	Predicted RBP	10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	TM4SF4	P48230	202 aa		10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	MKRN3	Q13064	507 aa	Known RBP	10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SLC39A6	Q13433	755 aa		10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	GPR153	Q6NV75	609 aa		10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	CFHR5	Q9BXR6	569 aa		10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	LAMA2	P24043	3122 aa	Known RBP	10.8	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	ZNF609	O15014	1411 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	RAD17	O75943	681 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	CAMTA2	O94983	1202 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SREBF2	Q12772	1141 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SAMD7	Q7Z3H4	446 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SLC51A	Q86UW1	340 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	CDCA5	Q96FF9	252 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SNX27	Q96L92	541 aa		10.79	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	WTIP	A6NIX2	430 aa	Predicted RBP	10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	STARD3NL	O95772	234 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	TNIP1	Q15025	636 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	GRIPAP1	Q4V328	841 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	AMOT	Q4VCS5	1084 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	NPM2	Q86SE8	214 aa	Known RBP	10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	SULF1	Q8IWU6	871 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	NR2E3	Q9Y5X4	410 aa		10.78	□□□□□ -0.68
RUNX1T1-223	ENST00000520172	PIEZO1	Q92508	2521 aa		10.77	□□□□□ -0.69
RUNX1T1-223	ENST00000520172	TCERG1	O14776	1098 aa	Known RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms