RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 CCDC141Q6ZP82 1450 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
CSMD1-206ENST00000520002 C6orf163Q5TEZ5 329 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 SELENOSQ9BQE4 189 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 MXRA7P84157 204 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 ALS2CR12Q96Q35 445 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
CSMD1-206ENST00000520002 SEPT14Q6ZU15 432 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 TSG101Q99816 390 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 NAPBQ9H115 298 aa9.97□□□□□ -0.81
CSMD1-206ENST00000520002 TPX2Q9ULW0 747 aaKnown RBP9.97□□□□□ -0.81
CSMD1-206ENST00000520002 INPP5BP32019 993 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 PCK1P35558 622 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.81
CSMD1-206ENST00000520002 CHMP4BP1P59074 171 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 PUF60Q9UHX1 559 aaKnown RBP9.96□□□□□ -0.81
CSMD1-206ENST00000520002 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.81
CSMD1-206ENST00000520002 HSP90AA4PQ58FG1 418 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 SMIM23A6NLE4 172 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 STAMBPO95630 424 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 APBB1IPQ7Z5R6 666 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-206ENST00000520002 MYRIPQ8NFW9 859 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 RAB11FIP3O75154 756 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 KARSQ15046 597 aaKnown RBP9.96□□□□□ -0.82
CSMD1-206ENST00000520002 PEX19P40855 299 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.82
CSMD1-206ENST00000520002 SLC12A7Q9Y666 1083 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
CSMD1-206ENST00000520002 AFAP1L1Q8TED9 768 aa9.96□□□□□ -0.82
CSMD1-206ENST00000520002 CCDC97Q96F63 343 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-206ENST00000520002 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 YEATS4O95619 227 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 OPA1O60313 960 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 PHAXQ9H814 394 aaKnown RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 PRPF4BQ13523 1007 aaKnown RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CFAP57Q96MR6 1250 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 AP1ARQ63HQ0 302 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CETN2P41208 172 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 TNIP1Q15025 636 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-206ENST00000520002 SYT10Q6XYQ8 523 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
CSMD1-206ENST00000520002 IQGAP2Q13576 1575 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 LIMCH1Q9UPQ0 1083 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 TSHZ3Q63HK5 1081 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 FAM114A1Q8IWE2 563 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 NCAPD3P42695 1498 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 TRIM21P19474 475 aaKnown RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 RARSP54136 660 aaKnown RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 RPAP2Q8IXW5 612 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 HDXQ7Z353 690 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 PPP2R5AQ15172 486 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 DZIP1Q86YF9 867 aaKnown RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 CTCFLQ8NI51 663 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-206ENST00000520002 DIXDC1Q155Q3 683 aa9.94□□□□□ -0.82
CSMD1-206ENST00000520002 F6X3S4 739 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 UBE2HP62256 183 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 HS1BP3Q53T59 392 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 OAS2P29728 719 aaKnown RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 USP48Q86UV5 1035 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 CRACR2BQ8N4Y2 399 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 HPDP32754 393 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 CCDC129Q6ZRS4 1044 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 HOOK3Q86VS8 718 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 MYD88Q99836 296 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 AKAP2Q9Y2D5 859 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 A0A1W2PRG0 241 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 CUL7Q14999 1698 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 CTAGE9A4FU28 777 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 GOLGA6L9A6NEM1 432 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 USO1O60763 962 aaKnown RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 MKNK2Q9HBH9 465 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 ZNF287Q9HBT7 754 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
CSMD1-206ENST00000520002 STARD3NLO95772 234 aa9.93□□□□□ -0.82
CSMD1-206ENST00000520002 SSRP1Q08945 709 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms