RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 GCKRQ14397 625 aa13.05□□□□□ -0.32
TRPS1-210ENST00000519815 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
TRPS1-210ENST00000519815 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
TRPS1-210ENST00000519815 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
TRPS1-210ENST00000519815 GRM8O00222 908 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 HMMRO75330 724 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 NBPF7P0C2Y1 421 aaPredicted RBP13.04□□□□□ -0.32
TRPS1-210ENST00000519815 KCNQ4P56696 695 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
TRPS1-210ENST00000519815 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
TRPS1-210ENST00000519815 SIRT2Q8IXJ6 389 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
TRPS1-210ENST00000519815 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 UTYO14607 1347 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 TJP1Q07157 1748 aa13.04□□□□□ -0.32
TRPS1-210ENST00000519815 CICQ96RK0 1608 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-210ENST00000519815 A0A087WZG4 1122 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
TRPS1-210ENST00000519815 HSP90AB3PQ58FF7 597 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 SMC5Q8IY18 1101 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 BTAF1O14981 1849 aa13.03□□□□□ -0.32
TRPS1-210ENST00000519815 BRWD3Q6RI45 1802 aa13.02□□□□□ -0.32
TRPS1-210ENST00000519815 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
TRPS1-210ENST00000519815 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
TRPS1-210ENST00000519815 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
TRPS1-210ENST00000519815 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
TRPS1-210ENST00000519815 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
TRPS1-210ENST00000519815 PLSCR1O15162 318 aa13.01□□□□□ -0.33
TRPS1-210ENST00000519815 GABBR2O75899 941 aa13.01□□□□□ -0.33
TRPS1-210ENST00000519815 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
TRPS1-210ENST00000519815 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
TRPS1-210ENST00000519815 H7C1W4 665 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 STK25O00506 426 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
TRPS1-210ENST00000519815 APBA3O96018 575 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 HLFQ16534 295 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 RASEFQ8IZ41 740 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
TRPS1-210ENST00000519815 DCTPP1Q9H773 170 aa13□□□□□ -0.33
TRPS1-210ENST00000519815 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
TRPS1-210ENST00000519815 COL15A1P39059 1388 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 CAMTA2O94983 1202 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 LRRC4BQ9NT99 713 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 RREB1Q92766 1687 aa12.99□□□□□ -0.33
TRPS1-210ENST00000519815 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 GNPATO15228 680 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 NUCB1Q02818 461 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 MTX1Q13505 466 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 CLEC4GQ6UXB4 293 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
TRPS1-210ENST00000519815 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 AK7Q96M32 723 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
TRPS1-210ENST00000519815 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 SRGAP3O43295 1099 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
TRPS1-210ENST00000519815 GPTP24298 496 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 CASP7P55210 303 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
TRPS1-210ENST00000519815 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
TRPS1-210ENST00000519815 LY75O60449 1722 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-210ENST00000519815 ZPR1O75312 459 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 NBR1Q14596 966 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-210ENST00000519815 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-210ENST00000519815 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
TRPS1-210ENST00000519815 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
TRPS1-210ENST00000519815 CLCN6P51797 869 aa12.95□□□□□ -0.34
TRPS1-210ENST00000519815 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
TRPS1-210ENST00000519815 ARHGEF1Q92888 912 aaKnown RBP12.95□□□□□ -0.34
TRPS1-210ENST00000519815 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 RFC4P35249 363 aa12.94□□□□□ -0.34
TRPS1-210ENST00000519815 RGS3P49796 1198 aa12.94□□□□□ -0.34
TRPS1-210ENST00000519815 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
TRPS1-210ENST00000519815 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 EPHA10Q5JZY3 1008 aa12.94□□□□□ -0.34
TRPS1-210ENST00000519815 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
TRPS1-210ENST00000519815 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRPS1-210ENST00000519815 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
TRPS1-210ENST00000519815 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms