RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SEC24BO95487 1268 aa17.98■□□□□ 0.47
CLN8-204ENST00000519254 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
CLN8-204ENST00000519254 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
CLN8-204ENST00000519254 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
CLN8-204ENST00000519254 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
CLN8-204ENST00000519254 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
CLN8-204ENST00000519254 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
CLN8-204ENST00000519254 SCN7AQ01118 1682 aa17.97■□□□□ 0.47
CLN8-204ENST00000519254 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
CLN8-204ENST00000519254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
CLN8-204ENST00000519254 PNMA6EA0A0J9YXQ4 647 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 ZPR1O75312 459 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 RFC4P35249 363 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 BAG6P46379 1132 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 ZNF827Q17R98 1081 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
CLN8-204ENST00000519254 ZNF652Q9Y2D9 606 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 CAMKK2Q96RR4 588 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 TFCP2L1Q9NZI6 479 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
CLN8-204ENST00000519254 UTYO14607 1347 aa17.95■□□□□ 0.46
CLN8-204ENST00000519254 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
CLN8-204ENST00000519254 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
CLN8-204ENST00000519254 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLN8-204ENST00000519254 IBTKQ9P2D0 1353 aaPredicted RBP17.94■□□□□ 0.46
CLN8-204ENST00000519254 ADRA2BP18089 450 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 SSFA2P28290 1259 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 TRIM28Q13263 835 aaKnown RBP17.94■□□□□ 0.46
CLN8-204ENST00000519254 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 HDAC5Q9UQL6 1122 aa17.94■□□□□ 0.46
CLN8-204ENST00000519254 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
CLN8-204ENST00000519254 SMARCA5O60264 1052 aaPredicted RBP17.93■□□□□ 0.46
CLN8-204ENST00000519254 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
CLN8-204ENST00000519254 C16orf71Q8IYS4 520 aaPredicted RBP17.93■□□□□ 0.46
CLN8-204ENST00000519254 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
CLN8-204ENST00000519254 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
CLN8-204ENST00000519254 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
CLN8-204ENST00000519254 BCL2L12Q9HB09 334 aa17.93■□□□□ 0.46
CLN8-204ENST00000519254 H7C1W4 665 aa17.92■□□□□ 0.46
CLN8-204ENST00000519254 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
CLN8-204ENST00000519254 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
CLN8-204ENST00000519254 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
CLN8-204ENST00000519254 APBB1O00213 710 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 CASP7P55210 303 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 POLA2Q14181 598 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 SRGAP3O43295 1099 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 EPHA10Q5JZY3 1008 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
CLN8-204ENST00000519254 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
CLN8-204ENST00000519254 EXOC6BQ9Y2D4 811 aa17.91■□□□□ 0.46
CLN8-204ENST00000519254 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
CLN8-204ENST00000519254 SUSD4Q5VX71 490 aa17.9■□□□□ 0.46
CLN8-204ENST00000519254 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
CLN8-204ENST00000519254 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
CLN8-204ENST00000519254 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
CLN8-204ENST00000519254 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
CLN8-204ENST00000519254 UTP14AQ9BVJ6 771 aaKnown RBP17.89■□□□□ 0.45
CLN8-204ENST00000519254 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
CLN8-204ENST00000519254 STK32BQ9NY57 414 aa17.88■□□□□ 0.45
CLN8-204ENST00000519254 CHMP3Q9Y3E7 222 aa17.88■□□□□ 0.45
CLN8-204ENST00000519254 RGL2O15211 777 aa17.87■□□□□ 0.45
CLN8-204ENST00000519254 MTX1Q13505 466 aa17.87■□□□□ 0.45
CLN8-204ENST00000519254 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
CLN8-204ENST00000519254 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
CLN8-204ENST00000519254 GYS1P13807 737 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 GSPT1P15170 499 aaKnown RBP17.86■□□□□ 0.45
CLN8-204ENST00000519254 NUTM1Q86Y26 1132 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 LRRCC1Q9C099 1032 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 SH3TC1Q8TE82 1336 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
CLN8-204ENST00000519254 NTSR2O95665 410 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 FOXO4P98177 505 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 SLC15A2Q16348 729 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
CLN8-204ENST00000519254 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
CLN8-204ENST00000519254 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 NBPF5PQ86XG9 351 aaPredicted RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 NOP58Q9Y2X3 529 aaKnown RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 SALL3Q9BXA9 1300 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 NPHP1O15259 732 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 HCLS1P14317 486 aaPredicted RBP17.84■□□□□ 0.45
CLN8-204ENST00000519254 NFIXQ14938 502 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms