RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 LINS1Q8NG48 757 aa22.49■■□□□ 1.19
TRAM1-202ENST00000518678 ABCC4O15439 1325 aa22.49■■□□□ 1.19
TRAM1-202ENST00000518678 NRXN2Q9P2S2 1712 aa22.48■■□□□ 1.19
TRAM1-202ENST00000518678 AFDNP55196 1824 aaKnown RBP22.48■■□□□ 1.19
TRAM1-202ENST00000518678 KIF13BQ9NQT8 1826 aa22.48■■□□□ 1.19
TRAM1-202ENST00000518678 ZNF784Q8NCA9 323 aaPredicted RBP22.48■■□□□ 1.19
TRAM1-202ENST00000518678 CCDC191Q8NCU4 936 aa22.48■■□□□ 1.19
TRAM1-202ENST00000518678 TNNQ9UQP3 1299 aa22.48■■□□□ 1.19
TRAM1-202ENST00000518678 IBTKQ9P2D0 1353 aaPredicted RBP22.48■■□□□ 1.19
TRAM1-202ENST00000518678 NEURL1BA8MQ27 555 aa22.47■■□□□ 1.19
TRAM1-202ENST00000518678 SERPINB2P05120 415 aa22.47■■□□□ 1.19
TRAM1-202ENST00000518678 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
TRAM1-202ENST00000518678 SUSD4Q5VX71 490 aa22.47■■□□□ 1.19
TRAM1-202ENST00000518678 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
TRAM1-202ENST00000518678 SRCIN1Q9C0H9 1055 aa22.47■■□□□ 1.19
TRAM1-202ENST00000518678 PPP1R42Q7Z4L9 355 aa22.46■■□□□ 1.19
TRAM1-202ENST00000518678 CWC25Q9NXE8 425 aaPredicted RBP22.46■■□□□ 1.19
TRAM1-202ENST00000518678 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
TRAM1-202ENST00000518678 PLIN1O60240 522 aa22.45■■□□□ 1.18
TRAM1-202ENST00000518678 ALDH1L1O75891 902 aa22.45■■□□□ 1.18
TRAM1-202ENST00000518678 NTSR2O95665 410 aa22.45■■□□□ 1.18
TRAM1-202ENST00000518678 CCT4P50991 539 aaKnown RBP22.45■■□□□ 1.18
TRAM1-202ENST00000518678 NBPF5PQ86XG9 351 aaPredicted RBP22.45■■□□□ 1.18
TRAM1-202ENST00000518678 CLUAP1Q96AJ1 413 aa22.45■■□□□ 1.18
TRAM1-202ENST00000518678 UTP14AQ9BVJ6 771 aaKnown RBP22.45■■□□□ 1.18
TRAM1-202ENST00000518678 NYXQ9GZU5 481 aa22.45■■□□□ 1.18
TRAM1-202ENST00000518678 FAM177BA6PVY3 158 aa22.44■■□□□ 1.18
TRAM1-202ENST00000518678 MS4A1P11836 297 aa22.44■■□□□ 1.18
TRAM1-202ENST00000518678 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
TRAM1-202ENST00000518678 DZIP1LQ8IYY4 767 aaKnown RBP22.44■■□□□ 1.18
TRAM1-202ENST00000518678 RNF123Q5XPI4 1314 aa22.43■■□□□ 1.18
TRAM1-202ENST00000518678 RRP1P56182 461 aaKnown RBP22.43■■□□□ 1.18
TRAM1-202ENST00000518678 GCKRQ14397 625 aa22.43■■□□□ 1.18
TRAM1-202ENST00000518678 INTS3Q68E01 1043 aaKnown RBP22.43■■□□□ 1.18
TRAM1-202ENST00000518678 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
TRAM1-202ENST00000518678 CNBD1Q8NA66 436 aa22.43■■□□□ 1.18
TRAM1-202ENST00000518678 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
TRAM1-202ENST00000518678 TRMT112Q9UI30 125 aaKnown RBP22.42■■□□□ 1.18
TRAM1-202ENST00000518678 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
TRAM1-202ENST00000518678 RLBP1P12271 317 aa22.41■■□□□ 1.18
TRAM1-202ENST00000518678 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
TRAM1-202ENST00000518678 PCCAP05165 728 aaPredicted RBP22.4■■□□□ 1.18
TRAM1-202ENST00000518678 GTF2E1P29083 439 aaPredicted RBP22.4■■□□□ 1.18
TRAM1-202ENST00000518678 TMEM57Q8N5G2 664 aa22.4■■□□□ 1.18
TRAM1-202ENST00000518678 ZBTB38Q8NAP3 1195 aaPredicted RBP22.4■■□□□ 1.18
TRAM1-202ENST00000518678 BRCA1P38398 1863 aaKnown RBP22.39■■□□□ 1.18
TRAM1-202ENST00000518678 NPHP1O15259 732 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 ST5P78524 1137 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 PDE3AQ14432 1141 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 ERFEQ4G0M1 354 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 NUTM1Q86Y26 1132 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 PANK1Q8TE04 598 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 FAM89AQ96GI7 184 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 C10orf71Q711Q0 1435 aa22.39■■□□□ 1.17
TRAM1-202ENST00000518678 H7C1W4 665 aa22.38■■□□□ 1.17
TRAM1-202ENST00000518678 SUPT16HQ9Y5B9 1047 aaKnown RBP22.38■■□□□ 1.17
TRAM1-202ENST00000518678 RIC1Q4ADV7 1423 aa22.38■■□□□ 1.17
TRAM1-202ENST00000518678 ABCC12Q96J65 1359 aa22.38■■□□□ 1.17
TRAM1-202ENST00000518678 GRM8O00222 908 aa22.37■■□□□ 1.17
TRAM1-202ENST00000518678 SLC10A5Q5PT55 438 aa22.37■■□□□ 1.17
TRAM1-202ENST00000518678 SYNE4Q8N205 404 aa22.37■■□□□ 1.17
TRAM1-202ENST00000518678 CCDC24Q8N4L8 307 aa22.37■■□□□ 1.17
TRAM1-202ENST00000518678 C9orf78Q9NZ63 289 aaPredicted RBP22.37■■□□□ 1.17
TRAM1-202ENST00000518678 UTYO14607 1347 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 CDHR2Q9BYE9 1310 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 LAMB2P55268 1798 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 CASP7P55210 303 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 RTL5Q5HYW3 569 aaPredicted RBP22.36■■□□□ 1.17
TRAM1-202ENST00000518678 C20orf194Q5TEA3 1177 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 JARID2Q92833 1246 aaPredicted RBP22.36■■□□□ 1.17
TRAM1-202ENST00000518678 DDX60Q8IY21 1712 aaKnown RBP22.36■■□□□ 1.17
TRAM1-202ENST00000518678 ANKRD31Q8N7Z5 1873 aa22.36■■□□□ 1.17
TRAM1-202ENST00000518678 A0A0G2JLW4 131 aa22.35■■□□□ 1.17
TRAM1-202ENST00000518678 UBE3BQ7Z3V4 1068 aa22.35■■□□□ 1.17
TRAM1-202ENST00000518678 ITPRIPQ8IWB1 547 aa22.35■■□□□ 1.17
TRAM1-202ENST00000518678 BRIP1Q9BX63 1249 aa22.35■■□□□ 1.17
TRAM1-202ENST00000518678 USP44Q9H0E7 712 aa22.35■■□□□ 1.17
TRAM1-202ENST00000518678 IRS4O14654 1257 aaPredicted RBP22.34■■□□□ 1.17
TRAM1-202ENST00000518678 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
TRAM1-202ENST00000518678 GRIN3BO60391 1043 aa22.33■■□□□ 1.17
TRAM1-202ENST00000518678 NBPF7P0C2Y1 421 aaPredicted RBP22.33■■□□□ 1.17
TRAM1-202ENST00000518678 HCLS1P14317 486 aaPredicted RBP22.33■■□□□ 1.17
TRAM1-202ENST00000518678 HSP90B1P14625 803 aaKnown RBP22.33■■□□□ 1.17
TRAM1-202ENST00000518678 MVPQ14764 893 aaKnown RBP22.33■■□□□ 1.17
TRAM1-202ENST00000518678 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
TRAM1-202ENST00000518678 KLRG2A4D1S0 409 aaPredicted RBP22.31■■□□□ 1.16
TRAM1-202ENST00000518678 DPEP1P16444 411 aa22.31■■□□□ 1.16
TRAM1-202ENST00000518678 PDE6BP35913 854 aa22.31■■□□□ 1.16
TRAM1-202ENST00000518678 MEIS3Q99687 375 aa22.31■■□□□ 1.16
TRAM1-202ENST00000518678 PLA2G12BQ9BX93 195 aa22.31■■□□□ 1.16
TRAM1-202ENST00000518678 PDE8AO60658 829 aa22.3■■□□□ 1.16
TRAM1-202ENST00000518678 GNAI3P08754 354 aa22.3■■□□□ 1.16
TRAM1-202ENST00000518678 NLRP3Q96P20 1036 aa22.3■■□□□ 1.16
TRAM1-202ENST00000518678 ZBTB7BO15156 539 aaPredicted RBP22.29■■□□□ 1.16
TRAM1-202ENST00000518678 UBTFL1P0CB47 393 aaPredicted RBP22.29■■□□□ 1.16
TRAM1-202ENST00000518678 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
TRAM1-202ENST00000518678 SUCLG2Q96I99 432 aa22.29■■□□□ 1.16
TRAM1-202ENST00000518678 DDX19BQ9UMR2 479 aa22.29■■□□□ 1.16
TRAM1-202ENST00000518678 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
TRAM1-202ENST00000518678 KCNA3P22001 575 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms