RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
LINCR-0001-201ENST00000517732 NPC1L1Q9UHC9 1359 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 CCDC85CA6NKD9 419 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 GRM1Q13255 1194 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 RPGRQ92834 1020 aaKnown RBP12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 CAPNS2Q96L46 248 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
LINCR-0001-201ENST00000517732 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 MLLT1Q03111 559 aaPredicted RBP12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 LARGE2Q8N3Y3 721 aa12.09□□□□□ -0.47
LINCR-0001-201ENST00000517732 USP50Q70EL3 339 aaPredicted RBP12.08□□□□□ -0.48
LINCR-0001-201ENST00000517732 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
LINCR-0001-201ENST00000517732 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
LINCR-0001-201ENST00000517732 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 CYP4F22Q6NT55 531 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 NBPF10Q6P3W6 841 aaKnown RBP12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 MCM10Q7L590 875 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 NBPF15Q8N660 670 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
LINCR-0001-201ENST00000517732 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 SNED1Q8TER0 1413 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 CA12O43570 354 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 NEFMP07197 916 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 MAP2K2P36507 400 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 SCNN1DP51172 638 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 HLFQ16534 295 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 TLL2Q9Y6L7 1015 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 COL4A5P29400 1685 aa12.06□□□□□ -0.48
LINCR-0001-201ENST00000517732 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 PPIP5K2O43314 1243 aa12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 EPS15P42566 896 aa12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 ADARB2Q9NS39 739 aaKnown RBP12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
LINCR-0001-201ENST00000517732 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 TAF7Q15545 349 aaPredicted RBP12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 CRAMP1Q96RY5 1269 aa12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 ANKRD36CQ5JPF3 1778 aa12.04□□□□□ -0.48
LINCR-0001-201ENST00000517732 AKAP11Q9UKA4 1901 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 LAMB2P55268 1798 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 TRAF5O00463 557 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 GPTP24298 496 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 RGS19P49795 217 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
LINCR-0001-201ENST00000517732 CELF2O95319 508 aaKnown RBP12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 CST9Q5W186 159 aa12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 NLRP3Q96P20 1036 aa12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
LINCR-0001-201ENST00000517732 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 AOC2O75106 756 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 MYL6BP14649 208 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 AOC3Q16853 763 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 SAPCD2Q86UD0 394 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 HHIPL1Q96JK4 782 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 BCL2L13Q9BXK5 485 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 ZBTB3Q9H5J0 574 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 PCDH10Q9P2E7 1040 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 ZNRF3Q9ULT6 936 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
LINCR-0001-201ENST00000517732 SUSD4Q5VX71 490 aa12□□□□□ -0.49
LINCR-0001-201ENST00000517732 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
LINCR-0001-201ENST00000517732 ATP6V0A2Q9Y487 856 aa12□□□□□ -0.49
LINCR-0001-201ENST00000517732 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
LINCR-0001-201ENST00000517732 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 NTSR2O95665 410 aa11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 DGKZQ13574 1117 aa11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 TNIP1Q15025 636 aa11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 CIAPIN1Q6FI81 312 aa11.99□□□□□ -0.49
LINCR-0001-201ENST00000517732 DPP8Q6V1X1 898 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms