RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 PCDHB9Q9Y5E1 797 aa2.24□□□□□ -2.05
RNU6-557P-201ENST00000516842 SAMD5Q5TGI4 173 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 SHISA5Q8N114 240 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 TMEM130Q8N3G9 435 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 DTWD1Q8N5C7 304 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 FLCNQ8NFG4 579 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 BHMTQ93088 406 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 FBXL18Q96ME1 805 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 ETNK1Q9HBU6 452 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 PAK6Q9NQU5 681 aaPredicted RBP2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 PIM2Q9P1W9 311 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 PARP3Q9Y6F1 533 aa2.23□□□□□ -2.05
RNU6-557P-201ENST00000516842 FOXD2O60548 495 aaPredicted RBP2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 PRNPP04156 253 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 NFKB2Q00653 900 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 BICDL1Q6ZP65 573 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 VSIG10LQ86VR7 867 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 WFDC8Q8IUA0 241 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 FAM84AQ96KN4 292 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 MFSD14AQ96MC6 490 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 CDCA7Q9BWT1 371 aaPredicted RBP2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 MRPL18Q9H0U6 180 aaKnown RBP2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 ACSS3Q9H6R3 686 aa2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU6-557P-201ENST00000516842 PITPNM2Q9BZ72 1349 aa2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 IGHA2P01877 340 aa2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 SKIP12755 728 aa2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 LSRQ86X29 649 aaPredicted RBP2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZNF295-AS1Q8N0V1 137 aa2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 UTP4Q969X6 686 aaKnown RBP2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 NIFKQ9BYG3 293 aaKnown RBP2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 DNAJB12Q9NXW2 375 aaKnown RBP2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 USP3Q9Y6I4 520 aa2.21□□□□□ -2.06
RNU6-557P-201ENST00000516842 LRRC10BA6NIK2 292 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 CPB1P15086 417 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 TATP17735 454 aaPredicted RBP2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 TXLNAP40222 546 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 BRPF1P55201 1214 aaPredicted RBP2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 DIXDC1Q155Q3 683 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 NBPF1Q3BBV0 1214 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZNF792Q3KQV3 632 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 MYSM1Q5VVJ2 828 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 FBXO31Q5XUX0 539 aaPredicted RBP2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZNF574Q6ZN55 896 aaPredicted RBP2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 FBXL6Q8N531 539 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 TSHZ2Q9NRE2 1034 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 LEMD3Q9Y2U8 911 aa2.2□□□□□ -2.06
RNU6-557P-201ENST00000516842 WISP1O95388 367 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 C1QTNF9P0C862 333 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 FOSL1P15407 271 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 NEUROD1Q13562 356 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 ANKLE2Q86XL3 938 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 TMEM40Q8WWA1 233 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 LPIN3Q9BQK8 851 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 KCNF1Q9H3M0 494 aa2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 HMX1Q9NP08 348 aaPredicted RBP2.19□□□□□ -2.06
RNU6-557P-201ENST00000516842 A0A0G2JLL6 359 aaPredicted RBP2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 BIN1O00499 593 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 TSPAN15O95858 294 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 KRT1P04264 644 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 F13BP05160 661 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 PLCL1Q15111 1095 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 MLANAQ16655 118 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 ESCO1Q5FWF5 840 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 PERM1Q5SV97 790 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 BEND4Q6ZU67 534 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 PRRT2Q7Z6L0 340 aaPredicted RBP2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 FAM35AQ86V20 835 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 P3H3Q8IVL6 736 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 AGBL5Q8NDL9 886 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 FAM83CQ9BQN1 747 aa2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.18□□□□□ -2.06
RNU6-557P-201ENST00000516842 AKAP8O43823 692 aaKnown RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 RNF20Q5VTR2 975 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 AMIGO3Q86WK7 504 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 WFDC3Q8IUB2 231 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 CLEC10AQ8IUN9 316 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 FAM20CQ8IXL6 584 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 GLIS3Q8NEA6 775 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 BHLHE22Q8NFJ8 381 aaPredicted RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 CRELD1Q96HD1 420 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 FAM46AQ96IP4 442 aaKnown RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 CCDC85AQ96PX6 553 aaPredicted RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 BSDC1Q9NW68 430 aaPredicted RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZDHHC3Q9NYG2 299 aa2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 ATP1B4Q9UN42 357 aaPredicted RBP2.17□□□□□ -2.06
RNU6-557P-201ENST00000516842 NPIPB6E9PJ23 425 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 FBXO45P0C2W1 286 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 BMP3P12645 472 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 MLLT1Q03111 559 aaPredicted RBP2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 SETDB1Q15047 1291 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 SKOR2Q2VWA4 1001 aaPredicted RBP2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 TSGA10IPQ3SY00 556 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 SYDE1Q6ZW31 735 aaPredicted RBP2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 SPRED2Q7Z698 418 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 C7orf43Q8WVR3 580 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 HSH2DQ96JZ2 352 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 CEP63Q96MT8 703 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms