RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MFSD14AQ96MC6 490 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 MRIQ9BWK5 157 aa2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 RC3H2Q9HBD1 1191 aaKnown RBP2.1□□□□□ -2.07
RNU6-539P-201ENST00000516665 ESPNB1AK53 854 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 ONECUT2O95948 504 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 HOXD8P13378 290 aaPredicted RBP2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 TBC1D8BQ0IIM8 1120 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 PSAPL1Q6NUJ1 521 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 TBC1D9Q6ZT07 1266 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 WFDC3Q8IUB2 231 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 CNKSR1Q969H4 720 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 COL26A1Q96A83 441 aa2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 FHDC1Q9C0D6 1143 aaPredicted RBP2.09□□□□□ -2.07
RNU6-539P-201ENST00000516665 GPR37O15354 613 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 NUAK1O60285 661 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 SLPIP03973 132 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 PLA2G4AP47712 749 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 EFEMP1Q12805 493 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 PDXDC2PQ6P474 469 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 LIN37Q96GY3 246 aaPredicted RBP2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 KCNC2Q96PR1 638 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 CD320Q9NPF0 282 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 NAGPAQ9UK23 515 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 SLC6A14Q9UN76 642 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
RNU6-539P-201ENST00000516665 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 F13BP05160 661 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 SPATS1Q496A3 300 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 BHLHA9Q7RTU4 235 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 CYP2U1Q7Z449 544 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 ADAM32Q8TC27 787 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 SPIRE2Q8WWL2 714 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 VWCEQ96DN2 955 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 FAM83CQ9BQN1 747 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 ESYT1Q9BSJ8 1104 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 ADAMTS6Q9UKP5 1117 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 HRH3Q9Y5N1 445 aa2.07□□□□□ -2.08
RNU6-539P-201ENST00000516665 RNASE1P07998 156 aaKnown RBP2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 ERVK-9P63128 1117 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 CRTC2Q53ET0 693 aaPredicted RBP2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 ARSJQ5FYB0 599 aaPredicted RBP2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 CC2D2BQ6DHV5 1058 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 PRR23BQ6ZRT6 265 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 CLEC10AQ8IUN9 316 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 SHISA5Q8N114 240 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 FBXL6Q8N531 539 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 LRRN4CLQ8ND94 238 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 ATG3Q9NT62 314 aa2.06□□□□□ -2.08
RNU6-539P-201ENST00000516665 RGS9O75916 674 aaPredicted RBP2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 GTF2E1P29083 439 aaPredicted RBP2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 SCTRP47872 440 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 GRIK5Q16478 980 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 FAM117BQ6P1L5 589 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 BEND4Q6ZU67 534 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 ZSWIM9Q86XI8 627 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 FAM20CQ8IXL6 584 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 RHBDD1Q8TEB9 315 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 TSC1Q92574 1164 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 FAM46AQ96IP4 442 aaKnown RBP2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 GPR20Q99678 358 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 OSBPL1AQ9BXW6 950 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 IRF2BPLQ9H1B7 796 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 MBNL3Q9NUK0 354 aaKnown RBP2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 ADAMTS20P59510 1910 aa2.05□□□□□ -2.08
RNU6-539P-201ENST00000516665 MATN3O15232 486 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 PLAURQ03405 335 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 SPEM2Q0P670 501 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 SFSWAPQ12872 951 aaKnown RBP2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 UVSSAQ2YD98 709 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 SAMD5Q5TGI4 173 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 XKR5Q6UX68 686 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 SPRED2Q7Z698 418 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 WFDC8Q8IUA0 241 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 UBE2OQ9C0C9 1292 aaKnown RBP2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 KCNF1Q9H3M0 494 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 OSBPL3Q9H4L5 887 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 FAM217BQ9NTX9 383 aaPredicted RBP2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 PCDHB15Q9Y5E8 787 aa2.04□□□□□ -2.08
RNU6-539P-201ENST00000516665 HRCP23327 699 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 LRCH2Q5VUJ6 765 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 ATG14Q6ZNE5 492 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 C1orf216Q8TAB5 229 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 BCL7CQ8WUZ0 217 aaPredicted RBP2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 AIDAQ96BJ3 306 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 SEMA6CQ9H3T2 930 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 IGFLR1Q9H665 355 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 GJA3Q9Y6H8 435 aa2.03□□□□□ -2.08
RNU6-539P-201ENST00000516665 CYP26A1O43174 497 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 TRAK2O60296 914 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 LINC00310P59036 64 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 KCNMB1Q16558 191 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 ZNF575Q86XF7 245 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 ZFPM1Q8IX07 1006 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 SEPT12Q8IYM1 358 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 WDR70Q9NW82 654 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 CRIM1Q9NZV1 1036 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 PCSK5Q92824 1860 aa2.02□□□□□ -2.09
RNU6-539P-201ENST00000516665 WISP1O95388 367 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms