RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 BSDC1Q9NW68 430 aaPredicted RBP1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 RTEL1Q9NZ71 1219 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 SLPIP03973 132 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 MDM2Q00987 491 aaPredicted RBP1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 EFEMP1Q12805 493 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 KCNA10Q16322 511 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 ZNF574Q6ZN55 896 aaPredicted RBP1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 SHISA5Q8N114 240 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 SPIRE2Q8WWL2 714 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 MFSD14AQ96MC6 490 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 KCNC2Q96PR1 638 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 FAM83CQ9BQN1 747 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 ESYT1Q9BSJ8 1104 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 MRIQ9BWK5 157 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 MRPL18Q9H0U6 180 aaKnown RBP1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 CD320Q9NPF0 282 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 LEMD3Q9Y2U8 911 aa1.44□□□□□ -2.18
RNU6-542P-201ENST00000516405 F13BP05160 661 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 RNASE1P07998 156 aaKnown RBP1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 ERVK-9P63128 1117 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 PLCL1Q15111 1095 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 CRTC2Q53ET0 693 aaPredicted RBP1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 GNASQ5JWF2 1037 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 LCE1EQ5T753 118 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 CIAPIN1Q6FI81 312 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 PSAPL1Q6NUJ1 521 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 TMEM214Q6NUQ4 689 aaKnown RBP1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 FAM117BQ6P1L5 589 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 SPRED2Q7Z698 418 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 CLEC10AQ8IUN9 316 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 NAGPAQ9UK23 515 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 ADAMTS6Q9UKP5 1117 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 PCDHB15Q9Y5E8 787 aa1.43□□□□□ -2.18
RNU6-542P-201ENST00000516405 NFIBO00712 420 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 TRAK2O60296 914 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 HRCP23327 699 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 SCTRP47872 440 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 PLAURQ03405 335 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 SFSWAPQ12872 951 aaKnown RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 SPATS1Q496A3 300 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 LRCH2Q5VUJ6 765 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 TBC1D9Q6ZT07 1266 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 BHLHA9Q7RTU4 235 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 FAM20CQ8IXL6 584 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 ADAM32Q8TC27 787 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 UTP4Q969X6 686 aaKnown RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 VWCEQ96DN2 955 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 LIN37Q96GY3 246 aaPredicted RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 FAM46AQ96IP4 442 aaKnown RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 RC3H2Q9HBD1 1191 aaKnown RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 FAM217BQ9NTX9 383 aaPredicted RBP1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 SLC6A14Q9UN76 642 aa1.42□□□□□ -2.18
RNU6-542P-201ENST00000516405 GRIN3BO60391 1043 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 RGS9O75916 674 aaPredicted RBP1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 PLA2G4AP47712 749 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 ARSJQ5FYB0 599 aaPredicted RBP1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 SAMD5Q5TGI4 173 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 CC2D2BQ6DHV5 1058 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 PRR23BQ6ZRT6 265 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 BEND4Q6ZU67 534 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 CYP2U1Q7Z449 544 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 ZNF575Q86XF7 245 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 MARCH10Q8NA82 808 aaPredicted RBP1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 RHBDD1Q8TEB9 315 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 KRTAP4-3Q9BYR4 195 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 XYLT2Q9H1B5 865 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 OSBPL3Q9H4L5 887 aa1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 MBNL3Q9NUK0 354 aaKnown RBP1.41□□□□□ -2.18
RNU6-542P-201ENST00000516405 MATN3O15232 486 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 NUAK1O60285 661 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 SPEM2Q0P670 501 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 UVSSAQ2YD98 709 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 PPP2R2DQ66LE6 453 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 ATG14Q6ZNE5 492 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 FBXL6Q8N531 539 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 LRRN4CLQ8ND94 238 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 C1orf216Q8TAB5 229 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 BCL7CQ8WUZ0 217 aaPredicted RBP1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 XAGE2Q96GT9 111 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 IRF2BPLQ9H1B7 796 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 SEMA6CQ9H3T2 930 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 ATG3Q9NT62 314 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 CRIM1Q9NZV1 1036 aa1.4□□□□□ -2.19
RNU6-542P-201ENST00000516405 CYP26A1O43174 497 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 BRPF1P55201 1214 aaPredicted RBP1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 TBC1D8BQ0IIM8 1120 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 RBM26Q5T8P6 1007 aaKnown RBP1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 XKR5Q6UX68 686 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZSWIM9Q86XI8 627 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 PPARGC1BQ86YN6 1023 aaKnown RBP1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 SEPT12Q8IYM1 358 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 AIDAQ96BJ3 306 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 OSBPL1AQ9BXW6 950 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 KCNK12Q9HB15 430 aa1.39□□□□□ -2.19
RNU6-542P-201ENST00000516405 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 TRIM13O60858 407 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 WISP1O95388 367 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 BMP3P12645 472 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 LINC00310P59036 64 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms