RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 H0YIN7 160 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 ZBTB7BO15156 539 aaPredicted RBP3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 SRGNP10124 158 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 FBLN1P23142 703 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 HUNKP57058 714 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 OTOP1Q7RTM1 612 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 CCDC102AQ96A19 550 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 ZNF333Q96JL9 665 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 ZNF692Q9BU19 519 aaPredicted RBP3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 SPINK5Q9NQ38 1064 aaPredicted RBP3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 PTPN22Q9Y2R2 807 aa3.59□□□□□ -1.83
RNU1-48P-201ENST00000516400 WDFY3Q8IZQ1 3526 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 LAMB2P55268 1798 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 TNFRSF10AO00220 468 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 HOXC9P31274 260 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 FKBP4Q02790 459 aaKnown RBP eCLIP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 USPL1Q5W0Q7 1092 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 FAM109BQ6ICB4 259 aaPredicted RBP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 ANKRD13DQ6ZTN6 518 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 ALYREFQ86V81 257 aaKnown RBP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZC3H15Q8WU90 426 aaKnown RBP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 SLC4A1APQ9BWU0 796 aaKnown RBP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 BRIP1Q9BX63 1249 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF277Q9NRM2 450 aaPredicted RBP3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 GPRC5DQ9NZD1 345 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 PCDH11XQ9BZA7 1347 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 PCDH11YQ9BZA8 1340 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 SCN7AQ01118 1682 aa3.58□□□□□ -1.84
RNU1-48P-201ENST00000516400 EPG5Q9HCE0 2579 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 PPEF1O14829 653 aaPredicted RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 CRKLP46109 303 aaKnown RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 CACNA1BQ00975 2339 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 PRR5LQ6MZQ0 368 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 PRPF40BQ6NWY9 871 aaKnown RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 SAMD1Q6SPF0 538 aaPredicted RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 SLC51AQ86UW1 340 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 NME9Q86XW9 330 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 RASAL3Q86YV0 1011 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 UBR2Q8IWV8 1755 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 REM2Q8IYK8 340 aaPredicted RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 STAP2Q9UGK3 403 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 NARFQ9UHQ1 456 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 U3KPZ7 1027 aaPredicted RBP3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 CHD8Q9HCK8 2581 aa3.57□□□□□ -1.84
RNU1-48P-201ENST00000516400 SCN9AQ15858 1988 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 PSME4Q14997 1843 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 TONSLQ96HA7 1378 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF292O60281 2723 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 SOS1Q07889 1333 aaPredicted RBP3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 RPTORQ8N122 1335 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 SHTN1A0MZ66 631 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 FKTNO75072 461 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 EGFRP00533 1210 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 IARSP41252 1262 aaKnown RBP3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 BCAMP50895 628 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 STYK1Q6J9G0 422 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 BICDL1Q6ZP65 573 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 CDC37L1Q7L3B6 337 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 USHBP1Q8N6Y0 703 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 PSMD1Q99460 953 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 P2RX7Q99572 595 aaKnown RBP3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 C11orf16Q9NQ32 467 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 ADARB2Q9NS39 739 aaKnown RBP3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 PDZRN3Q9UPQ7 1066 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 CACNA1GO43497 2377 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF318Q5VUA4 2279 aa3.56□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF609O15014 1411 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 SPEGQ15772 3267 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF157P51786 506 aaPredicted RBP3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 USP48Q86UV5 1035 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 LTV1Q96GA3 475 aaPredicted RBP3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 LRFN3Q9BTN0 628 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 GBA2Q9HCG7 927 aaPredicted RBP3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 HDAC9Q9UKV0 1011 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 MGAMO43451 1857 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
RNU1-48P-201ENST00000516400 DOCK3Q8IZD9 2030 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZDBF2Q9HCK1 2354 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 SMG1Q96Q15 3661 aaKnown RBP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 A0A1W2PP64 1363 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 KTN1Q86UP2 1357 aaKnown RBP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 PHKG2P15735 406 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 PDE6BP35913 854 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 CXCL9Q07325 125 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 SOGA3Q5TF21 947 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 TBC1D9BQ66K14 1250 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 SYMPKQ92797 1274 aaKnown RBP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 CNKSR1Q969H4 720 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZNF622Q969S3 477 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 MPHOSPH9Q99550 1183 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 IGSF5Q9NSI5 407 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 ZBTB12Q9Y330 459 aaPredicted RBP3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 TRIM17Q9Y577 477 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 FRYQ5TBA9 3013 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 NBEAQ8NFP9 2946 aa3.54□□□□□ -1.84
RNU1-48P-201ENST00000516400 ANKRD11Q6UB99 2663 aaPredicted RBP3.53□□□□□ -1.84
RNU1-48P-201ENST00000516400 TMEM265A0A087WTH1 108 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms