RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 THSD7BQ9C0I4 1608 aa12.54□□□□□ -0.4
RN7SKP52-201ENST00000516219 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP52-201ENST00000516219 FOXN1O15353 648 aa12.53□□□□□ -0.4
RN7SKP52-201ENST00000516219 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
RN7SKP52-201ENST00000516219 COL4A5P29400 1685 aa12.52□□□□□ -0.4
RN7SKP52-201ENST00000516219 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 NUP98P52948 1817 aa12.52□□□□□ -0.41
RN7SKP52-201ENST00000516219 DLG5Q8TDM6 1919 aa12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 H0YIN7 160 aa12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
RN7SKP52-201ENST00000516219 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
RN7SKP52-201ENST00000516219 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
RN7SKP52-201ENST00000516219 PASKQ96RG2 1323 aa12.5□□□□□ -0.41
RN7SKP52-201ENST00000516219 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
RN7SKP52-201ENST00000516219 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 PIP4K2AP48426 406 aaPredicted RBP12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
RN7SKP52-201ENST00000516219 TNRC18O15417 2968 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 LAMB2P55268 1798 aa12.47□□□□□ -0.41
RN7SKP52-201ENST00000516219 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 KCNQ3O43525 872 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 A1BGP04217 495 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 VEGFBP49765 207 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 BRIP1Q9BX63 1249 aa12.46□□□□□ -0.41
RN7SKP52-201ENST00000516219 CASP8AP2Q9UKL3 1982 aa12.45□□□□□ -0.42
RN7SKP52-201ENST00000516219 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
RN7SKP52-201ENST00000516219 SRGNP10124 158 aa12.45□□□□□ -0.42
RN7SKP52-201ENST00000516219 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
RN7SKP52-201ENST00000516219 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
RN7SKP52-201ENST00000516219 TAF1P21675 1872 aa12.44□□□□□ -0.42
RN7SKP52-201ENST00000516219 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
RN7SKP52-201ENST00000516219 PDE6BP35913 854 aa12.44□□□□□ -0.42
RN7SKP52-201ENST00000516219 LBX1P52954 281 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 FMR1Q06787 632 aaKnown RBP eCLIP12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
RN7SKP52-201ENST00000516219 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 A0A087WZG4 1122 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 EAPPQ56P03 285 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 ZNF277Q9NRM2 450 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
RN7SKP52-201ENST00000516219 STARD3NLO95772 234 aa12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 ANKRD36CQ5JPF3 1778 aa12.41□□□□□ -0.42
RN7SKP52-201ENST00000516219 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 DZIP3Q86Y13 1208 aaKnown RBP12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 CNKSR1Q969H4 720 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
RN7SKP52-201ENST00000516219 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 SLC34A2O95436 690 aa12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 ST5P78524 1137 aa12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
RN7SKP52-201ENST00000516219 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 EPHX2P34913 555 aa12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 TEFQ10587 303 aa12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
RN7SKP52-201ENST00000516219 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms