RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
GPN1-210ENST00000515877 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
GPN1-210ENST00000515877 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
GPN1-210ENST00000515877 NRAPQ86VF7 1730 aa10.6□□□□□ -0.71
GPN1-210ENST00000515877 IBTKQ9P2D0 1353 aaPredicted RBP10.59□□□□□ -0.71
GPN1-210ENST00000515877 SNRPA1P09661 255 aaKnown RBP10.59□□□□□ -0.71
GPN1-210ENST00000515877 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
GPN1-210ENST00000515877 BEGAINQ9BUH8 593 aa10.59□□□□□ -0.71
GPN1-210ENST00000515877 LNPKQ9C0E8 428 aa10.59□□□□□ -0.71
GPN1-210ENST00000515877 BTG4Q9NY30 223 aa10.59□□□□□ -0.71
GPN1-210ENST00000515877 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
GPN1-210ENST00000515877 ITGB4P16144 1822 aa10.59□□□□□ -0.71
GPN1-210ENST00000515877 UBTFL1P0CB47 393 aaPredicted RBP10.58□□□□□ -0.72
GPN1-210ENST00000515877 MYT1Q01538 1121 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 PDE4CQ08493 712 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 SLC39A6Q13433 755 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 KSR2Q6VAB6 950 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 POLR3EQ9NVU0 708 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 LRP6O75581 1613 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 GLI3P10071 1580 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 ADCY9O60503 1353 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 PI4KAP2A4QPH2 592 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 ALDH1L1O75891 902 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 PI4KAP1Q8N8J0 262 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 FBXW7Q969H0 707 aa10.58□□□□□ -0.72
GPN1-210ENST00000515877 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.72
GPN1-210ENST00000515877 UPF2Q9HAU5 1272 aaKnown RBP10.58□□□□□ -0.72
GPN1-210ENST00000515877 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
GPN1-210ENST00000515877 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 EIF5BO60841 1220 aaKnown RBP10.57□□□□□ -0.72
GPN1-210ENST00000515877 PRIM1P49642 420 aaKnown RBP10.57□□□□□ -0.72
GPN1-210ENST00000515877 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 BMP2KLQ5H9B9 411 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 BEND3Q5T5X7 828 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 BANK1Q8NDB2 785 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
GPN1-210ENST00000515877 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
GPN1-210ENST00000515877 ARFGEF2Q9Y6D5 1785 aa10.56□□□□□ -0.72
GPN1-210ENST00000515877 PATL2C9JE40 543 aaKnown RBP10.56□□□□□ -0.72
GPN1-210ENST00000515877 RBM25P49756 843 aaKnown RBP10.56□□□□□ -0.72
GPN1-210ENST00000515877 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
GPN1-210ENST00000515877 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
GPN1-210ENST00000515877 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
GPN1-210ENST00000515877 DDX54Q8TDD1 881 aaKnown RBP10.55□□□□□ -0.72
GPN1-210ENST00000515877 FOXD4L4Q8WXT5 416 aaPredicted RBP10.55□□□□□ -0.72
GPN1-210ENST00000515877 MAP3K2Q9Y2U5 619 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 TNS2Q63HR2 1409 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 PRAMEF22A3QJZ6 481 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 KIF3CO14782 793 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 TBC1D12O60347 775 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 ANXA1P04083 346 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
GPN1-210ENST00000515877 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
GPN1-210ENST00000515877 LRRFIP2Q9Y608 721 aaKnown RBP10.55□□□□□ -0.72
GPN1-210ENST00000515877 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
GPN1-210ENST00000515877 NEXNQ0ZGT2 675 aa10.54□□□□□ -0.72
GPN1-210ENST00000515877 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
GPN1-210ENST00000515877 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
GPN1-210ENST00000515877 NOP58Q9Y2X3 529 aaKnown RBP10.54□□□□□ -0.72
GPN1-210ENST00000515877 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 TIE1P35590 1138 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
GPN1-210ENST00000515877 MYSM1Q5VVJ2 828 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 TMOD3Q9NYL9 352 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
GPN1-210ENST00000515877 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
GPN1-210ENST00000515877 UTYO14607 1347 aa10.52□□□□□ -0.72
GPN1-210ENST00000515877 TUBGCP6Q96RT7 1819 aa10.52□□□□□ -0.72
GPN1-210ENST00000515877 KAT6BQ8WYB5 2073 aa10.52□□□□□ -0.72
GPN1-210ENST00000515877 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 EXOC5O00471 708 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 RAB11FIP3O75154 756 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 TEX13AQ9BXU3 409 aaPredicted RBP10.52□□□□□ -0.73
GPN1-210ENST00000515877 USP16Q9Y5T5 823 aa10.52□□□□□ -0.73
GPN1-210ENST00000515877 DOT1LQ8TEK3 1739 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 MYL6BP14649 208 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 RFC5P40937 340 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 AIMP1Q12904 312 aaKnown RBP10.51□□□□□ -0.73
GPN1-210ENST00000515877 MTX1Q13505 466 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 COPS6Q7L5N1 327 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
GPN1-210ENST00000515877 METTL22Q9BUU2 404 aaPredicted RBP10.51□□□□□ -0.73
GPN1-210ENST00000515877 LRRCC1Q9C099 1032 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 FAM217BQ9NTX9 383 aaPredicted RBP10.51□□□□□ -0.73
GPN1-210ENST00000515877 PNMA6EA0A0J9YXQ4 647 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 SEC24BO95487 1268 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 NBPF7P0C2Y1 421 aaPredicted RBP10.51□□□□□ -0.73
GPN1-210ENST00000515877 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 TTC22Q5TAA0 569 aa10.51□□□□□ -0.73
GPN1-210ENST00000515877 ANKRD13DQ6ZTN6 518 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms