RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	BCL9	O00512	1426 aa		12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	FAM177B	A6PVY3	158 aa		12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	STARD3NL	O95772	234 aa		12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	ERC2	O15083	957 aa		12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	L1TD1	Q5T7N2	865 aa	Known RBP	12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	EP400	Q96L91	3159 aa		12.83	□□□□□ -0.36
CDK18-222	ENST00000515494	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	PLBD2	Q8NHP8	589 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	PI4K2B	Q8TCG2	481 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	CHML	P26374	656 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	BARGIN	Q6ZT62	677 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	SASH1	O94885	1247 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	ITGB4	P16144	1822 aa		12.82	□□□□□ -0.36
CDK18-222	ENST00000515494	UTY	O14607	1347 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	CLASRP	Q8N2M8	674 aa	Known RBP	12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	ANO2	Q9NQ90	1003 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	NRAP	Q86VF7	1730 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	SPATA31A6	Q5VVP1	1343 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	SYNE4	Q8N205	404 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	ESYT1	Q9BSJ8	1104 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	PLEKHG2	Q9H7P9	1386 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	REC8	O95072	547 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	CYP19A1	P11511	503 aa	Predicted RBP	12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	HLF	Q16534	295 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	HSP90AB4P	Q58FF6	505 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	AACS	Q86V21	672 aa		12.81	□□□□□ -0.36
CDK18-222	ENST00000515494	GLI3	P10071	1580 aa		12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	TLR7	Q9NYK1	1049 aa	Known RBP	12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	ITPK1	Q13572	414 aa		12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	SNX21	Q969T3	373 aa		12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	LOC102724428	A0A0B4J2F2	783 aa		12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	IFIT2	P09913	472 aa	Known RBP	12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	SIK1	P57059	783 aa		12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	EAF2	Q96CJ1	260 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	GJD4	Q96KN9	370 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK18-222	ENST00000515494	ARID3A	Q99856	593 aa		12.79	□□□□□ -0.36
CDK18-222	ENST00000515494	QTRT2	Q9H974	415 aa	Known RBP	12.79	□□□□□ -0.36
CDK18-222	ENST00000515494	KIF6	Q6ZMV9	814 aa		12.79	□□□□□ -0.36
CDK18-222	ENST00000515494	PALD1	Q9ULE6	856 aa		12.79	□□□□□ -0.36
CDK18-222	ENST00000515494	HDAC5	Q9UQL6	1122 aa		12.79	□□□□□ -0.36
CDK18-222	ENST00000515494	FAM89A	Q96GI7	184 aa		12.78	□□□□□ -0.36
CDK18-222	ENST00000515494	DOT1L	Q8TEK3	1739 aa		12.78	□□□□□ -0.36
CDK18-222	ENST00000515494		K7ELQ4	463 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK18-222	ENST00000515494	CLCN1	P35523	988 aa		12.78	□□□□□ -0.36
CDK18-222	ENST00000515494	LMBR1L	Q6UX01	489 aa		12.78	□□□□□ -0.36
CDK18-222	ENST00000515494	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK18-222	ENST00000515494	CRKL	P46109	303 aa	Known RBP	12.77	□□□□□ -0.36
CDK18-222	ENST00000515494	CWC27	Q6UX04	472 aa	Known RBP	12.77	□□□□□ -0.36
CDK18-222	ENST00000515494	SEPT12	Q8IYM1	358 aa		12.77	□□□□□ -0.36
CDK18-222	ENST00000515494	CWC25	Q9NXE8	425 aa	Predicted RBP	12.77	□□□□□ -0.36
CDK18-222	ENST00000515494	PALLD	Q8WX93	1383 aa		12.77	□□□□□ -0.36
CDK18-222	ENST00000515494	PDCL3	Q9H2J4	239 aa		12.77	□□□□□ -0.37
CDK18-222	ENST00000515494	RABEP1	Q15276	862 aa		12.77	□□□□□ -0.37
CDK18-222	ENST00000515494	ECHDC1	Q9NTX5	307 aa		12.77	□□□□□ -0.37
CDK18-222	ENST00000515494	DZIP3	Q86Y13	1208 aa	Known RBP	12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	ERC1	Q8IUD2	1116 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	BBX	Q8WY36	941 aa	Predicted RBP	12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	PTPN12	Q05209	780 aa	Known RBP	12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	NOL8	Q76FK4	1167 aa	Known RBP	12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	CHMP5	Q9NZZ3	219 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	AOX1	Q06278	1338 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	ERBB4	Q15303	1308 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	CASP7	P55210	303 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	ZNF594	Q96JF6	807 aa	Predicted RBP	12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	BOLA2	Q9H3K6	86 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	NDUFB9	Q9Y6M9	179 aa		12.76	□□□□□ -0.37
CDK18-222	ENST00000515494	UBR2	Q8IWV8	1755 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	GLRX3	O76003	335 aa	Known RBP	12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	CNTROB	Q8N137	903 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	RFX5	P48382	616 aa	Predicted RBP	12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	TFCP2	Q12800	502 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	EDC3	Q96F86	508 aa	Known RBP	12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	TCIRG1	Q13488	830 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	INTS5	Q6P9B9	1019 aa	Known RBP	12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	TUBGCP6	Q96RT7	1819 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	GZF1	Q9H116	711 aa	Predicted RBP	12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	CCDC87	Q9NVE4	849 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	ARFGEF2	Q9Y6D5	1785 aa		12.75	□□□□□ -0.37
CDK18-222	ENST00000515494	NWD2	Q9ULI1	1742 aa		12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	NEK4	P51957	841 aa		12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	UPF3B	Q9BZI7	483 aa	Known RBP	12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	TRPC5	Q9UL62	973 aa	Predicted RBP	12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	AFDN	P55196	1824 aa	Known RBP	12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	TTC41P	Q6P2S7	1318 aa		12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	FOXO4	P98177	505 aa		12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	BICDL1	Q6ZP65	573 aa		12.74	□□□□□ -0.37
CDK18-222	ENST00000515494	MAP3K15	Q6ZN16	1313 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494		H7C1W4	665 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	RABL6	Q3YEC7	729 aa	Predicted RBP	12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	PRDM4	Q9UKN5	801 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	PAPPA	Q13219	1627 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	WNK3	Q9BYP7	1800 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	LINC00116	Q8NCU8	138 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	COPRS	Q9NQ92	184 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	LAMB4	A4D0S4	1761 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	DDIT3	P35638	169 aa		12.73	□□□□□ -0.37
CDK18-222	ENST00000515494	GPATCH3	Q96I76	525 aa		12.73	□□□□□ -0.37

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