RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 BICDL1Q6ZP65 573 aa26.51■■□□□ 1.83
LSM6-207ENST00000515311 MTFR1LQ9H019 292 aa26.51■■□□□ 1.83
LSM6-207ENST00000515311 MSL1Q68DK7 614 aa26.5■■□□□ 1.83
LSM6-207ENST00000515311 MVPQ14764 893 aaKnown RBP26.49■■□□□ 1.83
LSM6-207ENST00000515311 PPP1R42Q7Z4L9 355 aa26.49■■□□□ 1.83
LSM6-207ENST00000515311 ITPRIPQ8IWB1 547 aa26.49■■□□□ 1.83
LSM6-207ENST00000515311 MMP10P09238 476 aa26.48■■□□□ 1.83
LSM6-207ENST00000515311 DDR1Q08345 913 aa26.48■■□□□ 1.83
LSM6-207ENST00000515311 SUSD4Q5VX71 490 aa26.48■■□□□ 1.83
LSM6-207ENST00000515311 NYXQ9GZU5 481 aa26.48■■□□□ 1.83
LSM6-207ENST00000515311 POLRMTO00411 1230 aaKnown RBP26.47■■□□□ 1.83
LSM6-207ENST00000515311 ZBTB7AO95365 584 aa26.47■■□□□ 1.83
LSM6-207ENST00000515311 UTP14AQ9BVJ6 771 aaKnown RBP26.47■■□□□ 1.83
LSM6-207ENST00000515311 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
LSM6-207ENST00000515311 LAMB2P55268 1798 aa26.47■■□□□ 1.83
LSM6-207ENST00000515311 UTYO14607 1347 aa26.46■■□□□ 1.83
LSM6-207ENST00000515311 GRM8O00222 908 aa26.46■■□□□ 1.83
LSM6-207ENST00000515311 NTSR2O95665 410 aa26.46■■□□□ 1.83
LSM6-207ENST00000515311 NBPF5PQ86XG9 351 aaPredicted RBP26.46■■□□□ 1.83
LSM6-207ENST00000515311 ZBTB38Q8NAP3 1195 aaPredicted RBP26.46■■□□□ 1.83
LSM6-207ENST00000515311 DDX19BQ9UMR2 479 aa26.46■■□□□ 1.83
LSM6-207ENST00000515311 PCCAP05165 728 aaPredicted RBP26.45■■□□□ 1.82
LSM6-207ENST00000515311 USP44Q9H0E7 712 aa26.45■■□□□ 1.82
LSM6-207ENST00000515311 C9orf78Q9NZ63 289 aaPredicted RBP26.45■■□□□ 1.82
LSM6-207ENST00000515311 TRMT112Q9UI30 125 aaKnown RBP26.45■■□□□ 1.82
LSM6-207ENST00000515311 PARP3Q9Y6F1 533 aa26.45■■□□□ 1.82
LSM6-207ENST00000515311 H7C1W4 665 aa26.44■■□□□ 1.82
LSM6-207ENST00000515311 TPTE2Q6XPS3 522 aa26.44■■□□□ 1.82
LSM6-207ENST00000515311 SH3TC1Q8TE82 1336 aa26.43■■□□□ 1.82
LSM6-207ENST00000515311 SERPINB2P05120 415 aa26.43■■□□□ 1.82
LSM6-207ENST00000515311 CHMP4BQ9H444 224 aaKnown RBP26.43■■□□□ 1.82
LSM6-207ENST00000515311 DDX60Q8IY21 1712 aaKnown RBP26.42■■□□□ 1.82
LSM6-207ENST00000515311 CDHR2Q9BYE9 1310 aa26.42■■□□□ 1.82
LSM6-207ENST00000515311 GNAI3P08754 354 aa26.42■■□□□ 1.82
LSM6-207ENST00000515311 UBE3BQ7Z3V4 1068 aa26.42■■□□□ 1.82
LSM6-207ENST00000515311 CNBD1Q8NA66 436 aa26.42■■□□□ 1.82
LSM6-207ENST00000515311 RIC1Q4ADV7 1423 aa26.41■■□□□ 1.82
LSM6-207ENST00000515311 FAM177BA6PVY3 158 aa26.41■■□□□ 1.82
LSM6-207ENST00000515311 ZBTB7BO15156 539 aaPredicted RBP26.41■■□□□ 1.82
LSM6-207ENST00000515311 CASP7P55210 303 aa26.41■■□□□ 1.82
LSM6-207ENST00000515311 FAM89AQ96GI7 184 aa26.41■■□□□ 1.82
LSM6-207ENST00000515311 MEIS3Q99687 375 aa26.41■■□□□ 1.82
LSM6-207ENST00000515311 ATF5Q9Y2D1 282 aaPredicted RBP26.41■■□□□ 1.82
LSM6-207ENST00000515311 NBPF7P0C2Y1 421 aaPredicted RBP26.4■■□□□ 1.82
LSM6-207ENST00000515311 POLD1P28340 1107 aa26.4■■□□□ 1.82
LSM6-207ENST00000515311 PRR5LQ6MZQ0 368 aa26.4■■□□□ 1.82
LSM6-207ENST00000515311 CRBNQ96SW2 442 aa26.4■■□□□ 1.82
LSM6-207ENST00000515311 SGIP1Q9BQI5 828 aa26.4■■□□□ 1.82
LSM6-207ENST00000515311 HDAC5Q9UQL6 1122 aa26.4■■□□□ 1.82
LSM6-207ENST00000515311 MYH3P11055 1940 aa26.39■■□□□ 1.82
LSM6-207ENST00000515311 UBTFL1P0CB47 393 aaPredicted RBP26.39■■□□□ 1.82
LSM6-207ENST00000515311 HSP90B1P14625 803 aaKnown RBP26.39■■□□□ 1.82
LSM6-207ENST00000515311 NPHP1O15259 732 aa26.38■■□□□ 1.81
LSM6-207ENST00000515311 GTF2E1P29083 439 aaPredicted RBP26.38■■□□□ 1.81
LSM6-207ENST00000515311 ERFEQ4G0M1 354 aa26.38■■□□□ 1.81
LSM6-207ENST00000515311 SLC10A5Q5PT55 438 aa26.38■■□□□ 1.81
LSM6-207ENST00000515311 NUTM1Q86Y26 1132 aa26.38■■□□□ 1.81
LSM6-207ENST00000515311 ABCC12Q96J65 1359 aa26.37■■□□□ 1.81
LSM6-207ENST00000515311 PTGER2P43116 358 aa26.37■■□□□ 1.81
LSM6-207ENST00000515311 ST5P78524 1137 aa26.37■■□□□ 1.81
LSM6-207ENST00000515311 SPON1Q9HCB6 807 aa26.37■■□□□ 1.81
LSM6-207ENST00000515311 KIF13BQ9NQT8 1826 aa26.37■■□□□ 1.81
LSM6-207ENST00000515311 ANKRD31Q8N7Z5 1873 aa26.36■■□□□ 1.81
LSM6-207ENST00000515311 IRS4O14654 1257 aaPredicted RBP26.36■■□□□ 1.81
LSM6-207ENST00000515311 RTL5Q5HYW3 569 aaPredicted RBP26.36■■□□□ 1.81
LSM6-207ENST00000515311 SYNE4Q8N205 404 aa26.36■■□□□ 1.81
LSM6-207ENST00000515311 JARID2Q92833 1246 aaPredicted RBP26.36■■□□□ 1.81
LSM6-207ENST00000515311 PLA2G12BQ9BX93 195 aa26.36■■□□□ 1.81
LSM6-207ENST00000515311 ZBTB40Q9NUA8 1239 aa26.36■■□□□ 1.81
LSM6-207ENST00000515311 TNRC6CQ9HCJ0 1690 aaKnown RBP26.35■■□□□ 1.81
LSM6-207ENST00000515311 NEFLP07196 543 aa26.35■■□□□ 1.81
LSM6-207ENST00000515311 AAMPQ13685 434 aa26.35■■□□□ 1.81
LSM6-207ENST00000515311 C10orf71Q711Q0 1435 aa26.34■■□□□ 1.81
LSM6-207ENST00000515311 GNAI2P04899 355 aa26.34■■□□□ 1.81
LSM6-207ENST00000515311 IRX6P78412 446 aaPredicted RBP26.34■■□□□ 1.81
LSM6-207ENST00000515311 PDE8AO60658 829 aa26.32■■□□□ 1.8
LSM6-207ENST00000515311 HCLS1P14317 486 aaPredicted RBP26.32■■□□□ 1.8
LSM6-207ENST00000515311 KAZALD1Q96I82 304 aa26.32■■□□□ 1.8
LSM6-207ENST00000515311 SUCLG2Q96I99 432 aa26.32■■□□□ 1.8
LSM6-207ENST00000515311 BRIP1Q9BX63 1249 aa26.32■■□□□ 1.8
LSM6-207ENST00000515311 EXOC6Q8TAG9 804 aa26.31■■□□□ 1.8
LSM6-207ENST00000515311 LRRFIP2Q9Y608 721 aaKnown RBP26.31■■□□□ 1.8
LSM6-207ENST00000515311 FOXO4P98177 505 aa26.3■■□□□ 1.8
LSM6-207ENST00000515311 CTSWP56202 376 aa26.29■■□□□ 1.8
LSM6-207ENST00000515311 RABL6Q3YEC7 729 aaPredicted RBP26.29■■□□□ 1.8
LSM6-207ENST00000515311 CCDC24Q8N4L8 307 aa26.29■■□□□ 1.8
LSM6-207ENST00000515311 NLRP3Q96P20 1036 aa26.29■■□□□ 1.8
LSM6-207ENST00000515311 BICC1Q9H694 974 aaKnown RBP26.29■■□□□ 1.8
LSM6-207ENST00000515311 KLRG2A4D1S0 409 aaPredicted RBP26.28■■□□□ 1.8
LSM6-207ENST00000515311 EPHA10Q5JZY3 1008 aa26.28■■□□□ 1.8
LSM6-207ENST00000515311 PDE6BP35913 854 aa26.27■■□□□ 1.8
LSM6-207ENST00000515311 ANKRD44Q8N8A2 993 aa26.27■■□□□ 1.8
LSM6-207ENST00000515311 LRP5O75197 1615 aa26.27■■□□□ 1.8
LSM6-207ENST00000515311 COL11A2P13942 1736 aaPredicted RBP26.27■■□□□ 1.8
LSM6-207ENST00000515311 RTL9Q8NET4 1388 aa26.26■■□□□ 1.79
LSM6-207ENST00000515311 CSF1RP07333 972 aa26.26■■□□□ 1.79
LSM6-207ENST00000515311 SF3B3Q15393 1217 aaKnown RBP26.26■■□□□ 1.79
LSM6-207ENST00000515311 CRY2Q49AN0 593 aa26.26■■□□□ 1.79
LSM6-207ENST00000515311 C1orf115Q9H7X2 142 aa26.26■■□□□ 1.79
LSM6-207ENST00000515311 PDZRN3Q9UPQ7 1066 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms