RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
SNCAIP-221ENST00000515215 CLEC4GQ6UXB4 293 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 NARFQ9UHQ1 456 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 UBN2Q6ZU65 1347 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 GPTP24298 496 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 POLA2Q14181 598 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 ARHGEF1Q92888 912 aaKnown RBP15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 BICC1Q9H694 974 aaKnown RBP15.65■□□□□ 0.1
SNCAIP-221ENST00000515215 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 ADRA2BP18089 450 aa15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 RABL6Q3YEC7 729 aaPredicted RBP15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 SKAP1Q86WV1 359 aa15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.09
SNCAIP-221ENST00000515215 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 ZNF652Q9Y2D9 606 aa15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 COL24A1Q17RW2 1714 aa15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 SRGAP3O43295 1099 aa15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 NUCB1Q02818 461 aa15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
SNCAIP-221ENST00000515215 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 SSFA2P28290 1259 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 FOXO4P98177 505 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 CAMKK2Q96RR4 588 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 SRP68Q9UHB9 627 aaKnown RBP15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 MYH3P11055 1940 aa15.62■□□□□ 0.09
SNCAIP-221ENST00000515215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.61■□□□□ 0.09
SNCAIP-221ENST00000515215 PARP10Q53GL7 1025 aa15.61■□□□□ 0.09
SNCAIP-221ENST00000515215 RTL5Q5HYW3 569 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-221ENST00000515215 FAM89AQ96GI7 184 aa15.61■□□□□ 0.09
SNCAIP-221ENST00000515215 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
SNCAIP-221ENST00000515215 LAMB2P55268 1798 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 ZPR1O75312 459 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 PHF14O94880 888 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 SUSD4Q5VX71 490 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 RFC4P35249 363 aa15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 TRMT112Q9UI30 125 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-221ENST00000515215 NTSR2O95665 410 aa15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 EN1Q05925 392 aaPredicted RBP15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 EXOC6BQ9Y2D4 811 aa15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-221ENST00000515215 PDE4AP27815 886 aa15.58■□□□□ 0.08
SNCAIP-221ENST00000515215 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
SNCAIP-221ENST00000515215 ANKRD45Q5TZF3 282 aa15.58■□□□□ 0.08
SNCAIP-221ENST00000515215 UTP14AQ9BVJ6 771 aaKnown RBP15.58■□□□□ 0.08
SNCAIP-221ENST00000515215 LMBR1LQ6UX01 489 aa15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 LNPKQ9C0E8 428 aa15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 IRS4O14654 1257 aaPredicted RBP15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 CSF1RP07333 972 aa15.57■□□□□ 0.08
SNCAIP-221ENST00000515215 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
SNCAIP-221ENST00000515215 BAG6P46379 1132 aa15.56■□□□□ 0.08
SNCAIP-221ENST00000515215 RGS3P49796 1198 aa15.56■□□□□ 0.08
SNCAIP-221ENST00000515215 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
SNCAIP-221ENST00000515215 CASZ1Q86V15 1759 aa15.56■□□□□ 0.08
SNCAIP-221ENST00000515215 GYS1P13807 737 aa15.55■□□□□ 0.08
SNCAIP-221ENST00000515215 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
SNCAIP-221ENST00000515215 SF3B2Q13435 895 aaKnown RBP15.55■□□□□ 0.08
SNCAIP-221ENST00000515215 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
SNCAIP-221ENST00000515215 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
SNCAIP-221ENST00000515215 FAM177BA6PVY3 158 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 PDE8AO60658 829 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 DEFB132Q7Z7B7 95 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 SETDB2Q96T68 719 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 SMARCA5O60264 1052 aaPredicted RBP15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 CTSWP56202 376 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 HSP90AB4PQ58FF6 505 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 BICDL1Q6ZP65 573 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 COL23A1Q86Y22 540 aaPredicted RBP15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 LRRCC1Q9C099 1032 aa15.54■□□□□ 0.08
SNCAIP-221ENST00000515215 APBB1O00213 710 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 NFIXQ14938 502 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 NUTM1Q86Y26 1132 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 CCDC125Q86Z20 511 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 FLAD1Q8NFF5 587 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 PNPLA7Q6ZV29 1317 aa15.53■□□□□ 0.08
SNCAIP-221ENST00000515215 CARMIL3Q8ND23 1372 aa15.52■□□□□ 0.08
SNCAIP-221ENST00000515215 RHPN1Q8TCX5 695 aa15.52■□□□□ 0.08
SNCAIP-221ENST00000515215 NYXQ9GZU5 481 aa15.52■□□□□ 0.08
SNCAIP-221ENST00000515215 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
SNCAIP-221ENST00000515215 TM4SF1P30408 202 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms