RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 NLRP10Q86W26 655 aa21.13■□□□□ 0.97
AP3S1-208ENST00000515066 C9orf78Q9NZ63 289 aaPredicted RBP21.13■□□□□ 0.97
AP3S1-208ENST00000515066 ZNF652Q9Y2D9 606 aa21.13■□□□□ 0.97
AP3S1-208ENST00000515066 ZPR1O75312 459 aa21.12■□□□□ 0.97
AP3S1-208ENST00000515066 CASP7P55210 303 aa21.12■□□□□ 0.97
AP3S1-208ENST00000515066 CASZ1Q86V15 1759 aa21.12■□□□□ 0.97
AP3S1-208ENST00000515066 PNPLA7Q6ZV29 1317 aa21.12■□□□□ 0.97
AP3S1-208ENST00000515066 LAMB2P55268 1798 aa21.12■□□□□ 0.97
AP3S1-208ENST00000515066 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
AP3S1-208ENST00000515066 SLC15A2Q16348 729 aa21.11■□□□□ 0.97
AP3S1-208ENST00000515066 ILDR2Q71H61 639 aa21.11■□□□□ 0.97
AP3S1-208ENST00000515066 KAZALD1Q96I82 304 aa21.11■□□□□ 0.97
AP3S1-208ENST00000515066 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
AP3S1-208ENST00000515066 H7C1W4 665 aa21.1■□□□□ 0.97
AP3S1-208ENST00000515066 GNAI2P04899 355 aa21.1■□□□□ 0.97
AP3S1-208ENST00000515066 TBC1D9BQ66K14 1250 aa21.1■□□□□ 0.97
AP3S1-208ENST00000515066 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
AP3S1-208ENST00000515066 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
AP3S1-208ENST00000515066 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
AP3S1-208ENST00000515066 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
AP3S1-208ENST00000515066 GYS1P13807 737 aa21.09■□□□□ 0.97
AP3S1-208ENST00000515066 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
AP3S1-208ENST00000515066 NIP7Q9Y221 180 aaKnown RBP eCLIP21.09■□□□□ 0.97
AP3S1-208ENST00000515066 CEP85Q6P2H3 762 aa21.09■□□□□ 0.97
AP3S1-208ENST00000515066 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
AP3S1-208ENST00000515066 PCCAP05165 728 aaPredicted RBP21.08■□□□□ 0.96
AP3S1-208ENST00000515066 PARP10Q53GL7 1025 aa21.07■□□□□ 0.96
AP3S1-208ENST00000515066 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
AP3S1-208ENST00000515066 ZBTB38Q8NAP3 1195 aaPredicted RBP21.07■□□□□ 0.96
AP3S1-208ENST00000515066 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
AP3S1-208ENST00000515066 STK32BQ9NY57 414 aa21.07■□□□□ 0.96
AP3S1-208ENST00000515066 KDM2BQ8NHM5 1336 aa21.07■□□□□ 0.96
AP3S1-208ENST00000515066 IGHDP01880 384 aa21.06■□□□□ 0.96
AP3S1-208ENST00000515066 RTL5Q5HYW3 569 aaPredicted RBP21.06■□□□□ 0.96
AP3S1-208ENST00000515066 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
AP3S1-208ENST00000515066 ANKRD44Q8N8A2 993 aa21.06■□□□□ 0.96
AP3S1-208ENST00000515066 NTSR2O95665 410 aa21.05■□□□□ 0.96
AP3S1-208ENST00000515066 EPHA10Q5JZY3 1008 aa21.05■□□□□ 0.96
AP3S1-208ENST00000515066 FAM89AQ96GI7 184 aa21.05■□□□□ 0.96
AP3S1-208ENST00000515066 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
AP3S1-208ENST00000515066 RPAP2Q8IXW5 612 aaPredicted RBP21.05■□□□□ 0.96
AP3S1-208ENST00000515066 BICC1Q9H694 974 aaKnown RBP21.05■□□□□ 0.96
AP3S1-208ENST00000515066 NFIXQ14938 502 aa21.04■□□□□ 0.96
AP3S1-208ENST00000515066 BICDL1Q6ZP65 573 aa21.04■□□□□ 0.96
AP3S1-208ENST00000515066 TRMT112Q9UI30 125 aaKnown RBP21.04■□□□□ 0.96
AP3S1-208ENST00000515066 CDHR2Q9BYE9 1310 aa21.04■□□□□ 0.96
AP3S1-208ENST00000515066 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
AP3S1-208ENST00000515066 MTX1Q13505 466 aa21.03■□□□□ 0.96
AP3S1-208ENST00000515066 NRXN2Q9P2S2 1712 aa21.03■□□□□ 0.96
AP3S1-208ENST00000515066 RABL6Q3YEC7 729 aaPredicted RBP21.02■□□□□ 0.96
AP3S1-208ENST00000515066 SETDB2Q96T68 719 aa21.02■□□□□ 0.96
AP3S1-208ENST00000515066 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
AP3S1-208ENST00000515066 CARMIL3Q8ND23 1372 aa21.02■□□□□ 0.96
AP3S1-208ENST00000515066 FAM177BA6PVY3 158 aa21.02■□□□□ 0.95
AP3S1-208ENST00000515066 FOXO4P98177 505 aa21.02■□□□□ 0.95
AP3S1-208ENST00000515066 ATP8B2P98198 1209 aa21.02■□□□□ 0.95
AP3S1-208ENST00000515066 PLA2G12BQ9BX93 195 aa21.02■□□□□ 0.95
AP3S1-208ENST00000515066 HDAC5Q9UQL6 1122 aa21.02■□□□□ 0.95
AP3S1-208ENST00000515066 TM4SF1P30408 202 aa21.01■□□□□ 0.95
AP3S1-208ENST00000515066 PPP1R42Q7Z4L9 355 aa21.01■□□□□ 0.95
AP3S1-208ENST00000515066 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
AP3S1-208ENST00000515066 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
AP3S1-208ENST00000515066 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
AP3S1-208ENST00000515066 MSH5O43196 834 aa20.99■□□□□ 0.95
AP3S1-208ENST00000515066 POLA2Q14181 598 aa20.99■□□□□ 0.95
AP3S1-208ENST00000515066 SSH3Q8TE77 659 aa20.99■□□□□ 0.95
AP3S1-208ENST00000515066 RWDD1Q9H446 243 aaPredicted RBP20.99■□□□□ 0.95
AP3S1-208ENST00000515066 TNRC6CQ9HCJ0 1690 aaKnown RBP20.99■□□□□ 0.95
AP3S1-208ENST00000515066 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
AP3S1-208ENST00000515066 IRS4O14654 1257 aaPredicted RBP20.99■□□□□ 0.95
AP3S1-208ENST00000515066 DDR1Q08345 913 aa20.98■□□□□ 0.95
AP3S1-208ENST00000515066 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
AP3S1-208ENST00000515066 SRGAP3O43295 1099 aa20.97■□□□□ 0.95
AP3S1-208ENST00000515066 NLGN1Q8N2Q7 840 aa20.97■□□□□ 0.95
AP3S1-208ENST00000515066 ANKRD31Q8N7Z5 1873 aa20.97■□□□□ 0.95
AP3S1-208ENST00000515066 POLRMTO00411 1230 aaKnown RBP20.96■□□□□ 0.95
AP3S1-208ENST00000515066 HCLS1P14317 486 aaPredicted RBP20.96■□□□□ 0.95
AP3S1-208ENST00000515066 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 LMBR1LQ6UX01 489 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 NBPF5PQ86XG9 351 aaPredicted RBP20.96■□□□□ 0.95
AP3S1-208ENST00000515066 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 TAF1P21675 1872 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 HMMRO75330 724 aa20.96■□□□□ 0.95
AP3S1-208ENST00000515066 PDE8AO60658 829 aa20.95■□□□□ 0.94
AP3S1-208ENST00000515066 CSF1RP07333 972 aa20.95■□□□□ 0.94
AP3S1-208ENST00000515066 CTSWP56202 376 aa20.95■□□□□ 0.94
AP3S1-208ENST00000515066 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
AP3S1-208ENST00000515066 DCTPP1Q9H773 170 aa20.95■□□□□ 0.94
AP3S1-208ENST00000515066 TPTE2Q6XPS3 522 aa20.94■□□□□ 0.94
AP3S1-208ENST00000515066 RFX5P48382 616 aaPredicted RBP20.93■□□□□ 0.94
AP3S1-208ENST00000515066 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 PRR5LQ6MZQ0 368 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 TTLL11Q8NHH1 800 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 SPEF2Q9C093 1822 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 RIC1Q4ADV7 1423 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 COL4A1P02462 1669 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 SERPINB2P05120 415 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 CCDC24Q8N4L8 307 aa20.93■□□□□ 0.94
AP3S1-208ENST00000515066 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms