RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 SOGA3Q5TF21 947 aa11.43□□□□□ -0.58
TRIM6-211ENST00000515022 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
TRIM6-211ENST00000515022 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
TRIM6-211ENST00000515022 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
TRIM6-211ENST00000515022 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
TRIM6-211ENST00000515022 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM6-211ENST00000515022 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
TRIM6-211ENST00000515022 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
TRIM6-211ENST00000515022 AMER1Q5JTC6 1135 aaPredicted RBP11.42□□□□□ -0.58
TRIM6-211ENST00000515022 SLC51AQ86UW1 340 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 BEGAINQ9BUH8 593 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
TRIM6-211ENST00000515022 CST9Q5W186 159 aa11.41□□□□□ -0.58
TRIM6-211ENST00000515022 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-211ENST00000515022 NBPF5PQ86XG9 351 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-211ENST00000515022 COL4A5P29400 1685 aa11.4□□□□□ -0.58
TRIM6-211ENST00000515022 THSD7BQ9C0I4 1608 aa11.4□□□□□ -0.58
TRIM6-211ENST00000515022 KCNQ3O43525 872 aa11.4□□□□□ -0.58
TRIM6-211ENST00000515022 NPR1P16066 1061 aa11.4□□□□□ -0.58
TRIM6-211ENST00000515022 IL6STP40189 918 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-211ENST00000515022 IARSP41252 1262 aaKnown RBP11.4□□□□□ -0.58
TRIM6-211ENST00000515022 EPS15P42566 896 aa11.4□□□□□ -0.58
TRIM6-211ENST00000515022 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.59
TRIM6-211ENST00000515022 BCORQ6W2J9 1755 aa11.39□□□□□ -0.59
TRIM6-211ENST00000515022 FZD9O00144 591 aa11.39□□□□□ -0.59
TRIM6-211ENST00000515022 ECE1P42892 770 aa11.39□□□□□ -0.59
TRIM6-211ENST00000515022 DGKZQ13574 1117 aa11.39□□□□□ -0.59
TRIM6-211ENST00000515022 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
TRIM6-211ENST00000515022 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
TRIM6-211ENST00000515022 ZNF790Q6PG37 636 aa11.38□□□□□ -0.59
TRIM6-211ENST00000515022 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
TRIM6-211ENST00000515022 GPC2Q8N158 579 aa11.38□□□□□ -0.59
TRIM6-211ENST00000515022 IL17REQ8NFR9 667 aa11.38□□□□□ -0.59
TRIM6-211ENST00000515022 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
TRIM6-211ENST00000515022 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
TRIM6-211ENST00000515022 SCNN1DP51172 638 aa11.37□□□□□ -0.59
TRIM6-211ENST00000515022 SOX10P56693 466 aa11.37□□□□□ -0.59
TRIM6-211ENST00000515022 RTKN2Q8IZC4 609 aa11.37□□□□□ -0.59
TRIM6-211ENST00000515022 ZIC5Q96T25 663 aa11.37□□□□□ -0.59
TRIM6-211ENST00000515022 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
TRIM6-211ENST00000515022 EIF6P56537 245 aaKnown RBP11.36□□□□□ -0.59
TRIM6-211ENST00000515022 TEFQ10587 303 aa11.36□□□□□ -0.59
TRIM6-211ENST00000515022 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
TRIM6-211ENST00000515022 JDP2Q8WYK2 163 aa11.36□□□□□ -0.59
TRIM6-211ENST00000515022 TEX13AQ9BXU3 409 aaPredicted RBP11.36□□□□□ -0.59
TRIM6-211ENST00000515022 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRIM6-211ENST00000515022 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
TRIM6-211ENST00000515022 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
TRIM6-211ENST00000515022 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
TRIM6-211ENST00000515022 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
TRIM6-211ENST00000515022 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
TRIM6-211ENST00000515022 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
TRIM6-211ENST00000515022 KLRG2A4D1S0 409 aaPredicted RBP11.34□□□□□ -0.59
TRIM6-211ENST00000515022 MAP2K2P36507 400 aa11.34□□□□□ -0.59
TRIM6-211ENST00000515022 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
TRIM6-211ENST00000515022 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
TRIM6-211ENST00000515022 HLFQ16534 295 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
TRIM6-211ENST00000515022 KNSTRNQ9Y448 316 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
TRIM6-211ENST00000515022 ABCC12Q96J65 1359 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 PSMD1Q99460 953 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
TRIM6-211ENST00000515022 ZNF652Q9Y2D9 606 aa11.32□□□□□ -0.6
TRIM6-211ENST00000515022 POLR2AP24928 1970 aaKnown RBP11.31□□□□□ -0.6
TRIM6-211ENST00000515022 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
TRIM6-211ENST00000515022 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
TRIM6-211ENST00000515022 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
TRIM6-211ENST00000515022 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
TRIM6-211ENST00000515022 SHTN1A0MZ66 631 aa11.3□□□□□ -0.6
TRIM6-211ENST00000515022 CA12O43570 354 aa11.3□□□□□ -0.6
TRIM6-211ENST00000515022 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
TRIM6-211ENST00000515022 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
TRIM6-211ENST00000515022 NGEFQ8N5V2 710 aa11.3□□□□□ -0.6
TRIM6-211ENST00000515022 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
TRIM6-211ENST00000515022 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
TRIM6-211ENST00000515022 GMPSP49915 693 aaPredicted RBP11.29□□□□□ -0.6
TRIM6-211ENST00000515022 AOC3Q16853 763 aa11.29□□□□□ -0.6
TRIM6-211ENST00000515022 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
TRIM6-211ENST00000515022 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
TRIM6-211ENST00000515022 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
TRIM6-211ENST00000515022 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
TRIM6-211ENST00000515022 GPTP24298 496 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 HIRAP54198 1017 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms