RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
SGCA-211ENST00000514934 DUSP27Q5VZP5 1158 aa19.13■□□□□ 0.65
SGCA-211ENST00000514934 PCNTO95613 3336 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 LTBP1Q14766 1721 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 GLTPD2A6NH11 291 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 NPHP1O15259 732 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 TOMM70O94826 608 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 SLC10A5Q5PT55 438 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 TAOK3Q9H2K8 898 aa19.12■□□□□ 0.65
SGCA-211ENST00000514934 ADAMTSL1Q8N6G6 1762 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 KDM2BQ8NHM5 1336 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 HSPA6P17066 643 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 PARP10Q53GL7 1025 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 NLRP10Q86W26 655 aa19.11■□□□□ 0.65
SGCA-211ENST00000514934 TCIRG1Q13488 830 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 C8orf58Q8NAV2 365 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 MYH3P11055 1940 aa19.1■□□□□ 0.65
SGCA-211ENST00000514934 CCDC93Q567U6 631 aa19.09■□□□□ 0.65
SGCA-211ENST00000514934 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
SGCA-211ENST00000514934 RBM46Q8TBY0 533 aaKnown RBP19.09■□□□□ 0.65
SGCA-211ENST00000514934 DUOX1Q9NRD9 1551 aa19.09■□□□□ 0.65
SGCA-211ENST00000514934 RNF123Q5XPI4 1314 aa19.08■□□□□ 0.65
SGCA-211ENST00000514934 GNAI1P63096 354 aa19.08■□□□□ 0.64
SGCA-211ENST00000514934 AIMP1Q12904 312 aaKnown RBP19.08■□□□□ 0.64
SGCA-211ENST00000514934 ISCA1Q9BUE6 129 aa19.08■□□□□ 0.64
SGCA-211ENST00000514934 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.64
SGCA-211ENST00000514934 FKBP4Q02790 459 aaKnown RBP eCLIP19.07■□□□□ 0.64
SGCA-211ENST00000514934 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
SGCA-211ENST00000514934 WWC1Q8IX03 1113 aa19.07■□□□□ 0.64
SGCA-211ENST00000514934 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
SGCA-211ENST00000514934 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
SGCA-211ENST00000514934 CRAMP1Q96RY5 1269 aa19.07■□□□□ 0.64
SGCA-211ENST00000514934 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
SGCA-211ENST00000514934 GTF2E1P29083 439 aaPredicted RBP19.06■□□□□ 0.64
SGCA-211ENST00000514934 ALDH1B1P30837 517 aa19.06■□□□□ 0.64
SGCA-211ENST00000514934 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
SGCA-211ENST00000514934 HSP90AB3PQ58FF7 597 aa19.05■□□□□ 0.64
SGCA-211ENST00000514934 HYPKQ9NX55 129 aa19.05■□□□□ 0.64
SGCA-211ENST00000514934 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
SGCA-211ENST00000514934 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
SGCA-211ENST00000514934 PSMD1Q99460 953 aa19.04■□□□□ 0.64
SGCA-211ENST00000514934 PHAXQ9H814 394 aaKnown RBP19.04■□□□□ 0.64
SGCA-211ENST00000514934 MRS2Q9HD23 443 aa19.04■□□□□ 0.64
SGCA-211ENST00000514934 ZNF277Q9NRM2 450 aaPredicted RBP19.04■□□□□ 0.64
SGCA-211ENST00000514934 ABCC4O15439 1325 aa19.03■□□□□ 0.64
SGCA-211ENST00000514934 ZNF541Q9H0D2 1346 aa19.03■□□□□ 0.64
SGCA-211ENST00000514934 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
SGCA-211ENST00000514934 RTKN2Q8IZC4 609 aa19.03■□□□□ 0.64
SGCA-211ENST00000514934 TSR2Q969E8 191 aaKnown RBP19.03■□□□□ 0.64
SGCA-211ENST00000514934 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
SGCA-211ENST00000514934 HCLS1P14317 486 aaPredicted RBP19.02■□□□□ 0.64
SGCA-211ENST00000514934 VEGFAP15692 232 aaPredicted RBP19.02■□□□□ 0.64
SGCA-211ENST00000514934 DNAJC5GQ8N7S2 189 aa19.02■□□□□ 0.64
SGCA-211ENST00000514934 RPGRQ92834 1020 aaKnown RBP19.02■□□□□ 0.64
SGCA-211ENST00000514934 SPEF2Q9C093 1822 aa19.02■□□□□ 0.63
SGCA-211ENST00000514934 IL16Q14005 1332 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 ANP32CO43423 234 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 DDNO94850 711 aaPredicted RBP19.01■□□□□ 0.63
SGCA-211ENST00000514934 FSTL1Q12841 308 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 ZNF428Q96B54 188 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 L3MBTL3Q96JM7 780 aaPredicted RBP19.01■□□□□ 0.63
SGCA-211ENST00000514934 NLRP3Q96P20 1036 aa19.01■□□□□ 0.63
SGCA-211ENST00000514934 ATP5J2-PTCD1G3V325 749 aa19■□□□□ 0.63
SGCA-211ENST00000514934 FZD9O00144 591 aa19■□□□□ 0.63
SGCA-211ENST00000514934 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
SGCA-211ENST00000514934 IARSP41252 1262 aaKnown RBP19■□□□□ 0.63
SGCA-211ENST00000514934 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
SGCA-211ENST00000514934 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
SGCA-211ENST00000514934 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
SGCA-211ENST00000514934 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
SGCA-211ENST00000514934 PSME4Q14997 1843 aa18.99■□□□□ 0.63
SGCA-211ENST00000514934 SCN9AQ15858 1988 aa18.99■□□□□ 0.63
SGCA-211ENST00000514934 ZNF646O15015 1829 aaPredicted RBP18.98■□□□□ 0.63
SGCA-211ENST00000514934 POTEIP0CG38 1075 aa18.97■□□□□ 0.63
SGCA-211ENST00000514934 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
SGCA-211ENST00000514934 APLP1P51693 650 aa18.97■□□□□ 0.63
SGCA-211ENST00000514934 FAM89AQ96GI7 184 aa18.97■□□□□ 0.63
SGCA-211ENST00000514934 RTFDC1Q9BY42 306 aaPredicted RBP18.97■□□□□ 0.63
SGCA-211ENST00000514934 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
SGCA-211ENST00000514934 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
SGCA-211ENST00000514934 A0A1B0GUL6 1792 aa18.96■□□□□ 0.63
SGCA-211ENST00000514934 SF3B3Q15393 1217 aaKnown RBP18.96■□□□□ 0.63
SGCA-211ENST00000514934 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
SGCA-211ENST00000514934 SMC1BQ8NDV3 1235 aa18.96■□□□□ 0.63
SGCA-211ENST00000514934 HTRA3P83110 453 aa18.95■□□□□ 0.62
SGCA-211ENST00000514934 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
SGCA-211ENST00000514934 C16orf71Q8IYS4 520 aaPredicted RBP18.95■□□□□ 0.62
SGCA-211ENST00000514934 GRAPQ13588 217 aa18.94■□□□□ 0.62
SGCA-211ENST00000514934 CCDC30Q5VVM6 783 aa18.94■□□□□ 0.62
SGCA-211ENST00000514934 G2E3Q7L622 706 aa18.94■□□□□ 0.62
SGCA-211ENST00000514934 SP8Q8IXZ3 490 aa18.94■□□□□ 0.62
SGCA-211ENST00000514934 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
SGCA-211ENST00000514934 METTL22Q9BUU2 404 aaPredicted RBP18.94■□□□□ 0.62
SGCA-211ENST00000514934 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
SGCA-211ENST00000514934 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms