RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TCIRG1Q13488 830 aa31.71■■■□□ 2.67
SNF8-213ENST00000514929 WWC1Q8IX03 1113 aa31.71■■■□□ 2.67
SNF8-213ENST00000514929 RPGRQ92834 1020 aaKnown RBP31.71■■■□□ 2.67
SNF8-213ENST00000514929 CCDC88AQ3V6T2 1871 aa31.71■■■□□ 2.67
SNF8-213ENST00000514929 CCDC93Q567U6 631 aa31.7■■■□□ 2.67
SNF8-213ENST00000514929 ANKRD13DQ6ZTN6 518 aa31.7■■■□□ 2.67
SNF8-213ENST00000514929 C8orf58Q8NAV2 365 aa31.7■■■□□ 2.67
SNF8-213ENST00000514929 PLBD2Q8NHP8 589 aa31.7■■■□□ 2.67
SNF8-213ENST00000514929 C7orf43Q8WVR3 580 aa31.7■■■□□ 2.67
SNF8-213ENST00000514929 LTBP3Q9NS15 1303 aa31.7■■■□□ 2.66
SNF8-213ENST00000514929 NLRP10Q86W26 655 aa31.69■■■□□ 2.66
SNF8-213ENST00000514929 TIAM2Q8IVF5 1701 aa31.68■■■□□ 2.66
SNF8-213ENST00000514929 NCBP3Q53F19 620 aaKnown RBP31.67■■■□□ 2.66
SNF8-213ENST00000514929 TSR2Q969E8 191 aaKnown RBP31.67■■■□□ 2.66
SNF8-213ENST00000514929 NLRP3Q96P20 1036 aa31.67■■■□□ 2.66
SNF8-213ENST00000514929 RNF123Q5XPI4 1314 aa31.67■■■□□ 2.66
SNF8-213ENST00000514929 CHMP4AQ9BY43 222 aa31.66■■■□□ 2.66
SNF8-213ENST00000514929 TRMT112Q9UI30 125 aaKnown RBP31.65■■■□□ 2.66
SNF8-213ENST00000514929 SALL2Q9Y467 1007 aaPredicted RBP31.65■■■□□ 2.66
SNF8-213ENST00000514929 HOXA10P31260 410 aaPredicted RBP31.64■■■□□ 2.66
SNF8-213ENST00000514929 SLC10A5Q5PT55 438 aa31.64■■■□□ 2.66
SNF8-213ENST00000514929 FAM9BQ8IZU0 186 aa31.64■■■□□ 2.66
SNF8-213ENST00000514929 RBM17Q96I25 401 aaKnown RBP31.64■■■□□ 2.66
SNF8-213ENST00000514929 CCDC30Q5VVM6 783 aa31.63■■■□□ 2.65
SNF8-213ENST00000514929 OLFM4Q6UX06 510 aa31.63■■■□□ 2.65
SNF8-213ENST00000514929 C3orf67Q6ZVT6 689 aa31.63■■■□□ 2.65
SNF8-213ENST00000514929 RTKN2Q8IZC4 609 aa31.63■■■□□ 2.65
SNF8-213ENST00000514929 IL16Q14005 1332 aa31.63■■■□□ 2.65
SNF8-213ENST00000514929 GLTPD2A6NH11 291 aa31.62■■■□□ 2.65
SNF8-213ENST00000514929 TOMM70O94826 608 aa31.62■■■□□ 2.65
SNF8-213ENST00000514929 GOLGA2Q08379 1002 aa31.62■■■□□ 2.65
SNF8-213ENST00000514929 C16orf71Q8IYS4 520 aaPredicted RBP31.62■■■□□ 2.65
SNF8-213ENST00000514929 RRAGCQ9HB90 399 aa31.62■■■□□ 2.65
SNF8-213ENST00000514929 SH3TC1Q8TE82 1336 aa31.61■■■□□ 2.65
SNF8-213ENST00000514929 FKBP4Q02790 459 aaKnown RBP eCLIP31.61■■■□□ 2.65
SNF8-213ENST00000514929 RIC3Q7Z5B4 369 aa31.61■■■□□ 2.65
SNF8-213ENST00000514929 TSPYL6Q8N831 410 aa31.61■■■□□ 2.65
SNF8-213ENST00000514929 CRAMP1Q96RY5 1269 aa31.61■■■□□ 2.65
SNF8-213ENST00000514929 PHAXQ9H814 394 aaKnown RBP31.61■■■□□ 2.65
SNF8-213ENST00000514929 DICER1Q9UPY3 1922 aaKnown RBP31.61■■■□□ 2.65
SNF8-213ENST00000514929 ATP5J2-PTCD1G3V325 749 aa31.6■■■□□ 2.65
SNF8-213ENST00000514929 ZNF428Q96B54 188 aa31.6■■■□□ 2.65
SNF8-213ENST00000514929 HCLS1P14317 486 aaPredicted RBP31.59■■■□□ 2.65
SNF8-213ENST00000514929 DPY19L2Q6NUT2 758 aa31.59■■■□□ 2.65
SNF8-213ENST00000514929 SYNE4Q8N205 404 aa31.59■■■□□ 2.65
SNF8-213ENST00000514929 ISCA1Q9BUE6 129 aa31.59■■■□□ 2.65
SNF8-213ENST00000514929 CC2D2BQ6DHV5 1058 aa31.58■■■□□ 2.65
SNF8-213ENST00000514929 PPEF1O14829 653 aaPredicted RBP31.56■■■□□ 2.64
SNF8-213ENST00000514929 TWISTNBQ3B726 338 aaPredicted RBP31.56■■■□□ 2.64
SNF8-213ENST00000514929 WDR63Q8IWG1 891 aa31.56■■■□□ 2.64
SNF8-213ENST00000514929 ZNF277Q9NRM2 450 aaPredicted RBP31.56■■■□□ 2.64
SNF8-213ENST00000514929 TCERG1O14776 1098 aaKnown RBP31.55■■■□□ 2.64
SNF8-213ENST00000514929 DDX58O95786 925 aaKnown RBP31.54■■■□□ 2.64
SNF8-213ENST00000514929 STK31Q9BXU1 1019 aa31.54■■■□□ 2.64
SNF8-213ENST00000514929 VEGFAP15692 232 aaPredicted RBP31.53■■■□□ 2.64
SNF8-213ENST00000514929 HSPA6P17066 643 aa31.53■■■□□ 2.64
SNF8-213ENST00000514929 TRIM28Q13263 835 aaKnown RBP31.53■■■□□ 2.64
SNF8-213ENST00000514929 FAM89AQ96GI7 184 aa31.53■■■□□ 2.64
SNF8-213ENST00000514929 TMX4Q9H1E5 349 aaPredicted RBP31.53■■■□□ 2.64
SNF8-213ENST00000514929 LAMB2P55268 1798 aa31.53■■■□□ 2.64
SNF8-213ENST00000514929 FANCIQ9NVI1 1328 aa31.52■■■□□ 2.64
SNF8-213ENST00000514929 RBM46Q8TBY0 533 aaKnown RBP31.52■■■□□ 2.64
SNF8-213ENST00000514929 PSMD1Q99460 953 aa31.52■■■□□ 2.64
SNF8-213ENST00000514929 ABCC4O15439 1325 aa31.51■■■□□ 2.64
SNF8-213ENST00000514929 GRIPAP1Q4V328 841 aa31.51■■■□□ 2.63
SNF8-213ENST00000514929 MYD88Q99836 296 aa31.51■■■□□ 2.63
SNF8-213ENST00000514929 SNED1Q8TER0 1413 aa31.5■■■□□ 2.63
SNF8-213ENST00000514929 IARSP41252 1262 aaKnown RBP31.5■■■□□ 2.63
SNF8-213ENST00000514929 DDX46Q7L014 1031 aaKnown RBP31.5■■■□□ 2.63
SNF8-213ENST00000514929 RTL5Q5HYW3 569 aaPredicted RBP31.49■■■□□ 2.63
SNF8-213ENST00000514929 ATP6V0A2Q9Y487 856 aa31.48■■■□□ 2.63
SNF8-213ENST00000514929 DDX60Q8IY21 1712 aaKnown RBP31.47■■■□□ 2.63
SNF8-213ENST00000514929 WDR90Q96KV7 1748 aa31.47■■■□□ 2.63
SNF8-213ENST00000514929 BBOX1O75936 387 aa31.47■■■□□ 2.63
SNF8-213ENST00000514929 DDNO94850 711 aaPredicted RBP31.47■■■□□ 2.63
SNF8-213ENST00000514929 SLC51AQ86UW1 340 aa31.46■■■□□ 2.63
SNF8-213ENST00000514929 METTL22Q9BUU2 404 aaPredicted RBP31.46■■■□□ 2.63
SNF8-213ENST00000514929 MAP3K2Q9Y2U5 619 aa31.46■■■□□ 2.63
SNF8-213ENST00000514929 IRS4O14654 1257 aaPredicted RBP31.45■■■□□ 2.63
SNF8-213ENST00000514929 SLC4A2P04920 1241 aa31.45■■■□□ 2.63
SNF8-213ENST00000514929 CCDC191Q8NCU4 936 aa31.45■■■□□ 2.63
SNF8-213ENST00000514929 FSTL1Q12841 308 aa31.44■■■□□ 2.62
SNF8-213ENST00000514929 GRAPQ13588 217 aa31.44■■■□□ 2.62
SNF8-213ENST00000514929 KSR2Q6VAB6 950 aa31.44■■■□□ 2.62
SNF8-213ENST00000514929 ZBTB38Q8NAP3 1195 aaPredicted RBP31.44■■■□□ 2.62
SNF8-213ENST00000514929 GRAPLQ8TC17 118 aaPredicted RBP31.44■■■□□ 2.62
SNF8-213ENST00000514929 JDP2Q8WYK2 163 aa31.44■■■□□ 2.62
SNF8-213ENST00000514929 PI4KAP2A4QPH2 592 aa31.43■■■□□ 2.62
SNF8-213ENST00000514929 POTECB2RU33 542 aa31.43■■■□□ 2.62
SNF8-213ENST00000514929 EXOSC9Q06265 439 aaKnown RBP31.43■■■□□ 2.62
SNF8-213ENST00000514929 PI4KAP1Q8N8J0 262 aa31.43■■■□□ 2.62
SNF8-213ENST00000514929 CWC25Q9NXE8 425 aaPredicted RBP31.43■■■□□ 2.62
SNF8-213ENST00000514929 SF3B3Q15393 1217 aaKnown RBP31.42■■■□□ 2.62
SNF8-213ENST00000514929 SP8Q8IXZ3 490 aa31.42■■■□□ 2.62
SNF8-213ENST00000514929 SMC1BQ8NDV3 1235 aa31.42■■■□□ 2.62
SNF8-213ENST00000514929 MYH16Q9H6N6 1097 aa31.42■■■□□ 2.62
SNF8-213ENST00000514929 HSP90B1P14625 803 aaKnown RBP31.41■■■□□ 2.62
SNF8-213ENST00000514929 G2E3Q7L622 706 aa31.41■■■□□ 2.62
SNF8-213ENST00000514929 SPINK5Q9NQ38 1064 aaPredicted RBP31.41■■■□□ 2.62
SNF8-213ENST00000514929 ZNF541Q9H0D2 1346 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms